Job Description P00960 Confidence 89.11% Date Thu Jan 5 10:57:22 GMT 2012 Rank 34 Aligned Residues 118 % Identity 18% Template c3qo8A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of seryl-trna synthetase from candida albicans Resolution 2.00 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	.	.	.	.	.	.	.	.	.	.	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N	W	E
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		P	V	R	Y	A	G	Y	S	S	C	F	R	R	E	A	G	S	H	G	K	D	A	W	G	I	F	R	V	H	A	F	E	K	I	E	Q	F	V	L	T	E	P	E	K	S	W	E	E	F	D	R	M	I	G	C	S	E	E	F	Y	Q	S	L	G	L	P	.	.	.	.	Y	R	V	V	G	I	V	S	G	E
Template Known Secondary structure																T	T			S	T	T		S	S	S	S	S		S													G	G	G																			T	T			.	.	.	.								G	G	G
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	.	.	.	.	N	G	M	E	V	T	Q	F	T	Y	F	Q	Q	.	.	.	.	.	.	.	.	.	V	G	G	L	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I
Query Conservation																	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	N	A	A	A	K	K	Y	D	L	E	A	W	F	P	F	Q	Q	E	Y	K	E	L	V	S	C	S	N	C	T	D	Y	Q	S	R	N	L	E	I	R	C	G	I	K	K	Y	V	H	C	L	N	S	T	L	S	A	T	E	R	T	I	C	C	I
Template Known Secondary structure				T	T		S										T	T	T	T												T	T							T								B
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions