Job Description P00960 Confidence 93.85% Date Thu Jan 5 10:57:22 GMT 2012 Rank 28 Aligned Residues 118 % Identity 20% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	.	.	.	.	.	.	.	.	.	.	.	.	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		P	L	K	Y	A	G	M	S	T	C	F	R	K	E	A	G	A	H	G	R	D	T	L	G	I	F	R	V	H	Q	F	D	K	I	E	Q	F	V	V	C	S	P	R	Q	E	E	S	W	R	H	L	E	D	M	I	T	T	S	E	E	F	N	K	S	L	G	L	P	.	.	.	.	Y	R	V	V	N	I	C	S
Template Known Secondary structure																T	T		S	S	S			S	T	T	S	S		S													S	S	T	T																					T			.	.	.	.								T
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.				.	.	.	.	.	.	.	150													.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	E	N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	N	G	.	.	.	.	M	E	V	.	.	.	T	Q	F	T	Y	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	L	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I
Query Conservation																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	L	N	N	A	A	A	K	K	Y	D	L	E	A	W	F	P	A	S	G	A	F	R	E	L	V	S	C	S	N	C	T	D	Y	Q	S	Q	S	V	N	C	R	Y	G	P	N	L	R	Q	N	V	K	E	Y	C	H	M	L	N	G	T	L	C	A	I	T	R	T	M	C	C	I
Template Known Secondary structure		T	T			S	S		S										T	T	T	T												T	T							T				S	S						S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions