Job Description P00960 Confidence 7.79% Date Thu Jan 5 10:57:22 GMT 2012 Rank 88 Aligned Residues 94 % Identity 13% Template c3jrtA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron cassette protein vpc_cass2; PDBTitle: structure from the mobile metagenome of v. paracholerae:2 integron cassette protein vpc_cass2 Resolution 2.30 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		P	L	G	K	T	T	Y	G	D	V	F	H	Q	N	E	V	E	Q	S	T	Y	N	F	E	Y	A	D	V	D	F	L	F	T	C	F	E	Q	Y	E	.	K	E	A	Q	Q	L	L	A	L	E	N	P	L	P	L	P	A	Y	E	R	I	L	K	A	A	H	S	F	N	L	L	D	A	R	K	A	I	S	V	T
Query Conservation																																									.
Alig confidence																																									.																																	.	.
Template Conservation																																																																										.	.
Template Sequence		V	E	L	N	Q	K	Y	G	K	E	I	P	G	H	N	H	I	R	G	V	Y	N	N	E	I	N	K	N	T	A	I	K	K	L	R	N	H	C	V	A	H	V	S	D	K	S	K	Y	L	K	P	A	E	V	Q	E	E	I	I	K	X	F	D	G	N	F	A	D	E	F	L	D	.	.	W	I	C	P	D	N
Template Known Secondary structure													G	G	G																										S		T	T		T	T	S																T	S	S								.	.					T	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.
		268	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		E	R	Q	.	.	.	.	.	R	Y	I	L	R	I	R	T	L	T	K	A	V	A
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.
Template Conservation
Template Sequence		I	S	T	T	D	K	S	E	S	L	V	G	V	I	E	L	L	R	D	A	V	S
Template Known Secondary structure		T	T	S	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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