Job Description P00960 Confidence 41.89% Date Thu Jan 5 10:57:22 GMT 2012 Rank 61 Aligned Residues 115 % Identity 17% Template c3ikmC_ PDB info PDB header:transferase Chain: C: PDB Molecule:dna polymerase subunit gamma-2; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme Resolution 3.24 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																	.	.	.	.																							.	.	.	.	.
Query SS confidence																	.	.	.	.																							.	.	.	.	.
Query Sequence		P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	.	.	.	.	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	.	.	.	.	.	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N	W	E	N
Query Conservation																	.	.	.	.																							.	.	.	.	.
Alig confidence																	.	.	.	.																							.	.	.	.	.																							.	.
Template Conservation																																																																						.	.
Template Sequence		P	Y	G	L	A	Q	I	G	V	C	F	H	P	V	F	D	T	K	Q	I	R	N	G	V	K	S	I	G	E	K	T	E	A	S	L	V	W	F	T	P	P	R	T	S	N	Q	W	L	D	F	W	L	R	H	R	L	Q	W	W	R	K	F	A	M	S	P	S	N	.	.	F	S	S	S	D	C	Q	D	E	E
Template Known Secondary structure					B																S	S	S		S																	T	T																						S	S	T	T	S	.	.									S	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	L	G	A	W	G	L	G	W	E	V	W	L	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	V	T	Q	F	T	Y	F	Q	Q	V	G	G	L	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	R	K	G	N	K	L	Y	Y	N	F	P	W	G	K	E	L	I	E	T	L	W	N	L	G	D	H	E	L	L	H	M	Y	P	G	N	V	S	K	L	H	G	R	D	G	R	K	N	V	V	P	C	V	L	S	V	N	G	D	L	D	R	G	M	L	A	Y
Template Known Secondary structure		.	.	.	.	.	S											T	T												T	T	S	S					S			S	S		S				B	S	S	S	S	B													S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions