Job Description P00960 Confidence 20.29% Date Thu Jan 5 10:57:22 GMT 2012 Rank 71 Aligned Residues 146 % Identity 16% Template c3cmqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase, mitochondrial; PDBTitle: crystal structure of human mitochondrial phenylalanine trna2 synthetase Resolution 2.20 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																																				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	T	C	L	R	E	L	G	P	E	P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		A	H	.	Q	W	D	L	L	H	A	G	L	D	A	F	L	V	V	G	D	V	Y	R	R	D	Q	I	D	S	Q	H	Y	P	I	F	H	Q	L	E	A	V	R	L	F	S	K	H	E	L	F	A	G	I	K	D	G	E	S	L	Q	L	F	E	Q	S	S	R	S	A	H	K	Q	E	T	H	T	M	E	A	V
Template Known Secondary structure		G	G	.							T	T		S															B	T	T	B		S																	T	T	T	S	T	T	G	G	G			S	B							S	S			T	T	B
Template Predicted Secondary structure				.
Template SS confidence
		122	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160		.
Predicted Secondary structure																																																							.	.												.	.											.
Query SS confidence																																																							.	.												.	.											.
Query Sequence		I	K	P	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N	W	E	N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	N	G	.	.	M	E	V	T	Q	F	T	Y	F	Q	Q	.	.	V	G	G	L	E	C	K	P	V	T	.	G
Query Conservation																																																							.	.												.	.											.
Alig confidence				.																																			.	.	.	.	.												.	.												.	.											.
Template Conservation				.																																			.	.	.	.	.
Template Sequence		K	L	.	V	E	F	D	L	K	Q	T	L	T	R	L	M	A	H	L	F	G	D	E	L	E	I	R	W	V	D	C	Y	F	P	F	T	H	.	.	.	.	.	P	S	F	E	M	E	I	N	F	H	G	E	W	L	E	V	L	G	C	G	V	M	E	Q	Q	L	V	N	S	A	G	A	Q	D	R	I	G	W
Template Known Secondary structure				.																			T	T											T	T			.	.	.	.	.										T	T																			T	T		T	T
Template Predicted Secondary structure				.																																			.	.	.	.	.
Template SS confidence
		201	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	T	Y	G	L	E	R	L	A	M	Y	I	Q	G	V	D	S	V	Y	D	L	V	W	S	D	G	P	L	G	K	T	T	Y
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		A	F	G	L	G	L	E	R	L	A	M	I	L	Y	D	I	P	D	I	R	L	F	.	W	C	E	D	E	R	F	L	K	Q	F
Template Known Secondary structure															S					G	G	G	G	.	G								G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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