 |
Job Description | P00960 | Confidence | 9.90% | Date | Thu Jan 5 10:57:22 GMT 2012 |
Rank | 83 | Aligned Residues | 65 |
% Identity | 11% | Template | c3b64A_ |
PDB info |
PDB header:cytokine | Chain: A: PDB Molecule:macrophage migration inhibitory factor-like |
PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major
|
Resolution | 1.03 Å |
|
 |
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | P | E | P | M | A | A | A | Y | V | Q | P | S | R | R | P | T | D | G | R | Y | G | E | N | P | N | R | L | Q | H | Y | Y | Q | F | Q | V | V | I | K | P | S | P | D | N | I | Q | E | L | . |
. |
. |
. |
Y | L | G | S | L | K | E | L | G | M | D | P | T | I | H | D | I | R | F | V | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . |
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|
|   |
|   |   |   |   |   |
|   | . | . | . |
|
|
|
|   |
|
|   |
|   |   |   |
|   | . |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |
|
|
|
|   |
|   |   |
Template Sequence |   |
K | P | E | D | L | V | M | M | T | F | H | D | S | T | P | M | H | . |
. |
. |
F | F | G | S | T | D | P | V | A | C | V | R | V | E | . |
A | L | G | G | Y | G | P | S | E | P | E | K | V | T | S | I | V | T | A | A | I | T | K | E | C | G | I | V | A | D | R | I | F | V | L | Y | F | S |
Template Known Secondary structure |   |
S |
| G | G | G |
|  |  |  |  |  |
| S |
|
|
|
| . | . | . | B | T | T | B |
| S | S |
|  |  |  |  |  |  | . |
| T | T |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| G | G | G |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|