Job Description P00960 Confidence 97.52% Date Thu Jan 5 10:57:22 GMT 2012 Rank 10 Aligned Residues 165 % Identity 18% Template c2znjB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pyrrolysyl-trna synthetase from2 desulfitobacterium hafniense Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																												.	.	40	.	.	.	.	.						.	.	.	.	50	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		D	T	R	T	F	Q	G	L	I	L	T	L	Q	D	Y	W	A	R	Q	G	C	T	I	V	Q	P	L	D	M	E	V	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S	H	P	M	T	C	.	.	.	.	.	L	R	E	L	G	P	E
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		H	R	P	A	L	L	E	L	E	E	K	L	A	K	A	L	H	Q	Q	G	F	V	Q	V	V	T	P	T	I	I	T	K	S	A	L	A	K	M	T	I	G	E	D	H	P	L	F	S	Q	V	F	W	L	D	G	K	K	C	L	R	P	M	L	A	P	N	L	Y	T	L	W	R	E	L	E	R	L	W	D	K
Template Known Secondary structure			S																	T	T								S									T	T	T		S	S	S	S	T					S		B	S	S	S	S					S	S	S													T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	S	P	D	N	.	.	.	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N	W	E	N	P	T	L	G	A	W
Query Conservation																																											.	.	.
Alig confidence																								.	.																		.	.	.																		.	.												.	.	.	.	.	.
Template Conservation																								.	.																																						.	.												.	.	.	.	.	.
Template Sequence		P	I	R	I	F	E	I	G	T	C	Y	R	K	E	S	Q	G	A	Q	H	L	N	.	.	E	F	T	M	L	N	L	T	E	L	G	T	P	L	E	E	R	H	Q	R	L	E	D	M	A	R	W	V	L	E	A	A	G	I	R	E	F	.	.	E	L	V	T	E	S	S	V	V	Y	G	.	.	.	.	.	.
Template Known Secondary structure		S													S			S	S				S	.	.											T			G	G	G																	T					.	.								S	S	S	S	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																																						.	.												.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		G	L	G	W	E	V	W	L	N	G	M	E	V	T	Q	F	T	Y	F	Q	Q	.	.	V	G	G	L	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I	Q	G	V	D	S	V
Query Conservation																							.	.
Alig confidence		.																					.	.
Template Conservation		.
Template Sequence		.	D	T	V	D	V	M	K	G	D	L	E	L	A	S	G	A	M	G	P	H	F	L	D	E	K	W	E	I	F	D	P	W	V	G	L	G	F	G	L	E	R	L	L	M	I	R	E	G	T	Q	H	V
Template Known Secondary structure		.								T	T										S		T	T	T	T	T	T	T			S																		T		S		G
Template Predicted Secondary structure		.
Template SS confidence
			219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions