Job Description P00960 Confidence 96.17% Date Thu Jan 5 10:57:22 GMT 2012 Rank 21 Aligned Residues 162 % Identity 16% Template c2zimA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyrrolysyl-trna synthetase; PDBTitle: pyrrolysyl-trna synthetase bound to adenylated pyrrolysine and2 pyrophosphate Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																														.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	F	Q	G	L	I	L	T	L	Q	D	Y	W	A	R	Q	G	C	T	I	V	Q	P	L	D	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	A	G	T	S	H	P	M	T	C	L	R	E	L	G	P	E	P	M	A	A	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	L	G	K	L	E	R	E	I	T	R	F	F	V	D	R	G	F	L	E	I	K	S	P	I	L	I	P	L	E	Y	I	E	R	M	G	I	D	E	L	S	K	Q	I	F	R	V	D	K	N	F	C	L	R	P	M	L	A	P	N	L	Y	N	Y	L	R	K	L	D	R	A	L	P	D	P	I	K	I	F
Template Known Secondary structure																		T	T								S				T						T	T					G	G	G					T	T	T					S		S												T	T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	.	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N	W	E	N	P	T	L	G	A	W	G	L	G	W	E	V	W
Query Conservation																																		.
Alig confidence																			.	.														.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	G	P	C	Y	R	K	E	S	D	G	K	E	H	L	E	.	.	E	F	T	M	L	N	F	C	Q	M	G	S	G	C	T	R	E	N	L	E	S	I	I	T	D	F	L	N	H	L	G	I	D	F	K	I	V	G	D	S	C	.	.	.	.	.	.	.	.	.	.	M	V	Y	G	D	T	L	D	V	M
Template Known Secondary structure											S			S	S			S	.	.											S	T	T																		T											.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																			.	.																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.											.	.	.	.	.	.	.	.	390	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	N	G	M	E	V	T	Q	F	T	Y	F	Q	Q	V	G	G	L	E	.	.	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I	Q	G	V	D	S	V
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		H	G	D	L	E	L	S	S	A	V	V	G	P	I	P	L	D	R	E	W	G	I	D	K	P	W	I	G	A	G	F	G	L	E	R	L	L	K	V	K	H	D	F	K	N	I
Template Known Secondary structure			T	T									S			G	G	G	G	G	G	T			S																		T		S	S	G
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions