Job Description P00960 Confidence 97.16% Date Thu Jan 5 10:57:22 GMT 2012 Rank 13 Aligned Residues 175 % Identity 17% Template c2du4B_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys Resolution 2.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		L	R	E	L	G	P	E	P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	.	.	.	.	.	.	K	P	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D
Query Conservation																																												.	.	.	.	.	.
Alig confidence																									.	.					.	.	.	.										.	.	.	.	.	.																						.	.	.	.
Template Conservation																									.	.					.	.	.	.																																					.	.	.	.
Template Sequence		I	A	D	K	L	P	L	P	I	K	L	F	S	I	D	R	C	F	R	R	E	Q	G	.	.	E	D	A	T	.	.	.	.	R	L	Y	T	Y	F	S	A	S	C	V	L	V	D	E	E	L	S	V	D	D	G	K	A	V	A	E	A	L	L	R	Q	F	G	F	E	.	.	.	.	N	F	R	F	R	K	D
Template Known Secondary structure		T	T	T	T	S		S															T	T	.	.		T	T	T	.	.	.	.			S												S	S																T	T	T			.	.	.	.
Template Predicted Secondary structure																									.	.					.	.	.	.																																					.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.
		120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure			.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence			.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		N	.	.	.	.	W	E	N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	.	.	.	.	.	.	.	.	.	N	G	M	E	V	T	Q	F	T	Y	F	Q	Q	.	.	.	.	V	G	G	L	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I	Q	G	V	D	S	V	Y	D
Query Conservation			.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence			.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.	.	.						.	.
Template Conservation																																																							.	.
Template Sequence		E	K	R	S	K	Y	Y	I	P	D	T	Q	T	E	V	F	A	F	H	P	K	L	V	G	S	S	T	K	Y	S	D	G	W	I	E	I	A	T	F	G	I	Y	S	P	T	A	L	A	E	Y	D	I	P	.	.	Y	P	V	M	N	L	G	L	G	V	E	R	L	A	M	I	L	Y	G	Y	D	D	V	R	K
Template Known Secondary structure		T	T			T	T	B		T	T	T													T		S	S	T	T	T												B							T	T	T			.	.	S																		T		S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	V	W	S	D	G	P	L	G	K	T	T	Y	G	D	V	F	.	H	Q	N	E	V	E	Q	S	T	Y	N	F	E	Y	A	D	V	D	F	L	F	T	C	F	E	Q	Y	E	K	E	A	Q	Q	L	L	A	L	E	N
Query Conservation																			.
Alig confidence								.	.	.	.	.	.						.
Template Conservation								.	.	.	.	.	.
Template Sequence		M	V	Y	P	Q	I	.	.	.	.	.	.	H	G	E	I	K	L	S	D	L	D	I	A	R	E	I	K	V	K	E	V	P	Q	T	A	V	G	L	K	I	A	Q	S	I	V	E	T	A	E	K	H	A	S	E	P	S
Template Known Secondary structure					T	T	T	.	.	.	.	.	.	T	T												T				S	S				S																	T	T	S	S	B	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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