Job Description P00960 Confidence 91.03% Date Thu Jan 5 10:57:22 GMT 2012 Rank 32 Aligned Residues 118 % Identity 21% Template c2dq0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog Resolution 2.60 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	.	.	.	.	.	.	.	.	.	.	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N	W	E
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		P	L	L	Y	V	G	V	S	P	C	F	R	K	E	A	G	T	A	G	K	D	T	K	G	I	F	R	V	H	Q	F	H	K	V	E	Q	F	V	Y	S	R	P	E	E	S	W	E	W	H	E	K	I	I	R	N	A	E	E	L	F	Q	E	L	E	I	P	.	.	.	.	Y	R	V	V	N	I	C	T	G	D
Template Known Secondary structure		S														T	T		S	S		S			S	S	S	S		S													T	T	T																			T	T			.	.	.	.								G	G	G
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.														.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																			.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																			.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	N	G	.	.	.	.	M	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	T	Y	F	Q	Q	V	G	G	L	E	C	K	P	V	T	G	E	.	I	T	Y	G	L	E	R	L	A	M	Y	I
Query Conservation																			.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																			.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		L	G	Y	V	A	A	K	K	Y	D	I	E	A	W	M	P	G	Q	G	K	F	R	E	V	V	S	A	S	N	C	T	D	W	Q	A	R	R	L	N	I	R	F	R	D	R	T	D	E	K	P	R	Y	V	H	T	L	N	S	T	A	I	A	T	S	R	A	I	V	A	I
Template Known Secondary structure		S		S	S		S										T	T	T	T												T	T	T	T					T					S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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