Job Description P00960 Confidence 97.10% Date Thu Jan 5 10:57:22 GMT 2012 Rank 14 Aligned Residues 176 % Identity 20% Template c1wydB_ PDB info PDB header:ligase Chain: B: PDB Molecule:hypothetical aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii Resolution 2.30 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.														.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	L	I	L	T	L	Q	D	Y	W	A	R	Q	G	C	T	I	V	.	.	.	.	.	Q	P	L	D	M	E	V	G	A	G	T	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	T	C	L	R	E	L	G	P	E	P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G
Query Conservation																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																																																																																.	.
Template Sequence		S	L	A	L	K	A	F	R	E	T	L	Y	K	E	G	F	I	E	I	F	T	P	K	I	I	A	S	A	T	E	G	G	A	Q	L	F	P	V	I	Y	F	G	K	E	A	F	L	A	Q	S	P	Q	L	Y	K	E	L	M	A	G	V	V	E	R	V	F	E	V	A	P	A	W	R	A	E	E	S	D	.	.
Template Known Secondary structure															T	T								S			S	S		S	S	T	T									T	T							S		S												S																.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.				.	.
Template Sequence		.	.	T	P	F	.	.	H	L	A	E	F	I	S	M	D	V	E	M	A	F	A	D	Y	N	D	V	M	Q	L	L	E	K	I	L	H	N	I	V	K	T	I	K	E	E	G	K	E	E	L	K	I	L	N	Y	E	P	P	E	V	K	I	P	I	K	R	L	K	Y	T	E	A	I	E	I	L	R	S	K	G
Template Known Secondary structure		.	.	S	S	S	.	.			S											S																									S								T								S	S																T	T
Template Predicted Secondary structure		.	.				.	.
Template SS confidence
				216	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
			118	.	120	.	.																																					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Query SS confidence		.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Query Sequence		.	E	D	N	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	N	G	M	E	V	T	Q	F	T	Y	F	Q	Q	V	G	G	L	.	.	.	.	.	.
Query Conservation		.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Alig confidence		.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.									.	.	.	.	.	.
Template Conservation																																																																			.
Template Sequence		Y	N	I	K	F	G	D	D	I	G	T	P	E	L	R	I	L	N	E	E	L	K	E	D	L	Y	F	I	V	D	W	P	S	D	A	R	P	F	Y	T	K	S	K	S	E	N	P	E	L	S	E	S	F	D	L	I	Y	K	F	L	E	I	V	S	G	.	S	T	R	N	H	K	R	E	V	L	E	E	A	L
Template Known Secondary structure						T	T																S		S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							T	T							.			B			S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370
																				155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I	Q	G	V	D	S	V	Y	D	L	.	V	W	S	D	G	P	L	G	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		K	K	K	G	L	K	P	E	S	F	E	F	F	L	K	W	F	D	Y	G	M	P	P	H	A	G	F	G	M	G	L	A	R	L	M	V	M	L	T	G	I	Q	S	V	K	E	I	V	P	F	P	R	D	K	K	R	L
Template Known Secondary structure			T	T	T			G	G	G	G					G	G	G	G	S																									T	T	T	T	S	S	S			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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