Job Description P00960 Confidence 94.71% Date Thu Jan 5 10:57:22 GMT 2012 Rank 25 Aligned Residues 118 % Identity 21% Template c1sryB_ PDB info PDB header:ligase(synthetase) Chain: B: PDB Molecule:seryl-trna synthetase; PDBTitle: refined crystal structure of the seryl-trna synthetase from2 thermus thermophilus at 2.5 angstroms resolution Resolution 2.50 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																			.	.	.	.	.								.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.								.	.	.	.	.	.	.
Query Sequence		P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	.	.	.	.	.	V	I	K	P	S	P	D	.	.	.	.	.	.	.	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	N
Query Conservation																																			.	.	.	.	.								.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.								.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		P	L	R	Y	A	G	Y	A	P	A	F	R	S	E	A	G	S	F	G	K	D	V	R	G	L	M	R	V	H	Q	F	H	K	V	E	Q	Y	V	L	T	E	A	S	L	E	A	S	D	R	A	F	Q	E	L	L	E	N	A	E	E	I	L	R	L	L	E	L	P	.	.	.	.	Y	R	L	V	E	V	A	T
Template Known Secondary structure		S															S	S		T	T	S	S		S	S	S	S		S													S																								T			.	.	.	.								T
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.				.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		W	E	N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	N	G	.	.	.	.	M	E	V	.	.	.	T	Q	F	T	Y	F	Q	Q	.	.	.	.	.	.	.	.	.	.	V	G	G	L	E	C	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I
Query Conservation																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	M	G	P	G	K	W	R	Q	V	D	I	E	V	Y	L	P	S	E	G	R	Y	R	E	T	H	S	C	S	A	L	L	D	W	Q	A	R	R	A	N	L	R	Y	R	D	P	E	G	R	V	R	Y	A	Y	T	L	N	N	T	A	L	A	T	P	R	I	L	A	M	L
Template Known Secondary structure		T	T	S		T	T		S										G	G	G	T													T	T	T					T						T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions