Job Description P00960 Confidence 97.68% Date Thu Jan 5 10:57:22 GMT 2012 Rank 9 Aligned Residues 178 % Identity 19% Template c1b70A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase; PDBTitle: phenylalanyl trna synthetase complexed with phenylalanine Resolution 2.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																																															.	.	.	.	.	40	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Q	G	L	I	L	T	L	Q	D	Y	W	A	R	Q	G	C	T	I	V	Q	P	L	D	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	A	G	T	S	H	P
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	L	M	E	R	E	L	V	E	I	F	R	A	L	G	Y	Q	A	V	E	G	P	E	V	E	S	E	F	F	N	F	D	A	L	N	I	P	E	H	H	P	A	R	D	M	W	D	T	F	W	L	T	G	E	G	F	R	L	E	G	P	L	G	E	E	V	E	G	R	L	L	L	R	T	H	T	S	P	M
Template Known Secondary structure															T	T	T								S								T	T	T	T	T			S	S	S	T	T	G	G	G	S				B				S	S				B		T	T	S		B			S						S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.																															.	.
Query SS confidence																																																	.																															.	.
Query Sequence		M	T	C	L	R	E	L	G	P	E	P	M	A	A	A	Y	V	Q	P	S	R	R	P	T	D	G	R	Y	G	E	N	P	N	R	L	Q	H	Y	Y	Q	F	Q	V	V	I	K	P	.	S	P	D	N	I	Q	E	L	Y	L	G	S	L	K	E	L	G	M	D	P	T	I	H	D	I	R	F	V	E	D	.	.
Query Conservation																																																	.																															.	.
Alig confidence																																				.	.												.																				.	.										.	.
Template Conservation																																				.	.																																.	.
Template Sequence		Q	V	R	Y	M	V	A	H	T	P	P	F	R	I	V	V	P	G	R	V	F	R	F	E	Q	T	D	A	T	H	E	A	V	F	.	.	H	Q	L	E	G	L	V	V	G	E	G	I	A	M	A	H	L	K	G	A	I	Y	E	L	A	Q	A	L	F	G	P	.	.	D	S	K	V	R	F	Q	P	V	Y	F
Template Known Secondary structure											S	S																B	T	T	B		S			.	.										T	T																		S		S	.	.	S										B
Template Predicted Secondary structure																																				.	.																																.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.															.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	W	E	N	P	T	L	G	A	W	G	L	G	W	E	V	W	L	N	G	.	.	.	.	.	.	M	E	V	T	Q	F	T	Y	F	Q	Q	V	G	G	L	E	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	V	T	G	E	I	T	Y	G	L	E	R	L	A	M	Y	I	Q	G	V	D	S
Query Conservation																						.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.
Template Sequence		P	F	V	E	.	.	.	.	.	.	.	P	G	A	Q	F	A	V	W	W	P	E	G	G	K	W	L	E	L	G	G	A	G	M	V	H	P	K	V	F	Q	A	V	D	A	Y	R	E	R	L	G	L	P	P	A	Y	R	G	V	T	G	F	A	F	G	L	G	V	E	R	L	A	M	L	R	Y	G	I	P	D
Template Known Secondary structure		T	T			.	.	.	.	.	.	.										T	T	T	T																										T	T						T	T																			T		S
Template Predicted Secondary structure						.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	D	L	V	W	S	D	G	P	L	G	K	T	T	Y	G	D	V
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		I	R	Y	F	.	F	G	G	R	L	K	F	L	E	Q	F	K	G	V
Template Known Secondary structure		G	G	G	G	.	G	S							G	G	G	T	T
Template Predicted Secondary structure						.
Template SS confidence
		332	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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