Job Description P16659 Confidence 100.00% Date Thu Jan 5 11:35:16 GMT 2012 Rank 27 Aligned Residues 282 % Identity 23% Template d1nyra4 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.80

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		22	.		.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure				.										.	.	.
Query SS confidence				.										.	.	.
Query Sequence		S	H	.	Q	L	M	L	R	A	G	M	I	.	.	.	R	K	L	A	S	G	L	Y	T	W	L	P	T	G	V	R	V	L	K	K	V	E	N	I	V	R	E	E	M	N	N	A	G	A	I	E	V	S	M	P	V	V	Q	P	A	D	L	W	Q	E	S	G	R	W	E	Q	Y	G	P	E	L	L	R	F	V
Query Conservation				.										.	.	.
Alig confidence				.										.	.	.
Template Conservation
Template Sequence		D	H	R	K	I	G	K	E	L	E	L	F	T	N	S	Q	L	V	G	A	G	L	P	L	W	L	P	N	G	A	T	I	R	R	E	I	E	R	Y	I	V	D	K	E	V	S	M	G	Y	D	H	V	Y	T	P	V	L	A	N	V	D	L	Y	K	T	S	G	H	W	D	H	Y	Q	E	D	M	F	P	P	M
Template Known Secondary structure										T	T						T	T	T																													T	T								S				T							T						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		98	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure								.																																												.
Query SS confidence								.																																												.
Query Sequence		D	R	G	E	R	P	.	F	V	L	G	P	T	H	E	E	V	I	T	D	L	I	R	N	E	L	S	S	Y	K	Q	L	P	L	N	F	Y	Q	I	Q	T	K	F	R	D	E	V	R	P	R	.	F	G	V	M	R	S	R	E	F	L	M	K	D	A	Y	S	F	H	T	S	Q	E	S	L	Q	E	T	Y	D
Query Conservation								.																																												.
Alig confidence								.																																												.																					.
Template Conservation																																																																									.
Template Sequence		Q	L	D	E	T	E	S	M	V	L	R	P	M	N	C	P	H	H	M	M	I	Y	A	N	K	P	H	S	Y	R	E	L	P	I	R	I	A	E	L	G	T	M	H	R	Y	E	A	S	G	A	V	S	G	L	Q	R	V	R	G	M	T	L	N	D	S	H	I	F	V	R	P	.	D	Q	I	K	E	E	F	K
Template Known Secondary structure				T	T	T							S	S	S										T	S			B	G	G	G																	T	T	T		B	T	T	T	B		S													G	.	G	G
Template Predicted Secondary structure																																																																									.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Y	A	A	Y	S	K	I	F	S	R	M	G	L	D	F	R	A	V	Q	A	D	T	G	S	I	G	G	S	A	S	H	E	F	Q	V	L	A	Q	S	G	E	D	D	V	V	F	S	D	T	S	D	Y	A	A	N	I	E	L	A	E	A	I	A	P	K	E	P	R	A	A	A	T	Q	E	M	T	L	V
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	V	N	M	I	I	D	V	Y	K	D	F	G	F	E	D	Y	S	F	R	L	S	Y	R	D	P	E	D	K	E	K	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T																S	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	P	N	A	K	T	I	A	E	L	V	E	Q	F	N	L	P	I	E	K	T	V	K	T	L	L	V	K	A	V	E	G	S	S	F	P	Q	V	A	L	L	V	R	G	D	H	E	L	N	E	V	K	A	E	K	L	P	Q	V	A	S	P	L	T	F	A	T	E	E	E	I	R	A	V	V	K	A	G	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	D	D	M	W	N	K	A	E	N	M	L	K	E	A	A	D	E	L	G	L	S	Y	E	E	.	.	.	.	.	A	I	G	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.			S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
																																														435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460						.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	L	G	P	V	N	M	P	I	P	V	V	I	D	R	T	V	A	A	M	S	D	F	A	A	G	A	N	I	D	G	K	H	Y	F	G	I	N	W	D	R	D	V	A	T	P	E	V	A	D	I	R	N	V	V	A	G	D	P	S	P	D	G	Q	G	R	L	L	I	K	R	G	I	E	V	G	H	I	F
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		A	F	Y	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	D	V	Q	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	M	G	K	E	E	T	L	S	T	A	.
Template Known Secondary structure		B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S									.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		466	.	.	.	470																																				.	.	.	.	.	.	.																					.	.	480	.	.	.	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		Q	L	G	T	K	Y	S	E	A	L	K	A	S	V	Q	G	E	D	G	R	N	Q	I	L	T	M	G	C	Y	G	I	.	.	G	V	T	R	V	V	A	A	A
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		Q	L	D	F	L	L	P	E	R	F	D	L	T	Y	I	G	Q	D	G	E	H	H	R	P	V	V	I	H	R	G	V	V	S	T	M	E	R	F	V	A	F	L
Template Known Secondary structure					S	S					T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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