Job Description P16659 Confidence 99.84% Date Thu Jan 5 11:35:16 GMT 2012 Rank 67 Aligned Residues 290 % Identity 13% Template d1b8aa2 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 1.90

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	L	K	K	V	E	N	I	V	R	E	E	M	N	N	A	G	A	I	E	V	S	M	P	V	V	Q	P	A	D	L	W	Q	E	S	G	R	W	E	Q	Y	G	P	E	L	L	R	F	V	D	R	G	E	R	P	F	V	L	G	P	T	H	E	E	V	I	T	D	L	I	R	N	E	L	S	S	Y	K
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.											.																											.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.											.																											.	.	.
Template Sequence		F	K	I	R	S	S	V	F	K	A	V	R	D	F	F	H	E	N	G	F	I	E	I	H	T	P	K	I	I	A	T	A	.	.	.	.	.	.	.	.	T	E	G	G	T	E	L	F	P	M	.	K	Y	F	E	E	D	A	F	L	A	E	S	P	Q	L	Y	K	E	I	M	M	A	S	G	L	D	.	.	.
Template Known Secondary structure																			T	T								S			S			.	.	.	.	.	.	.	.		S	S	S	S	S					.			T	T							S		S							G	G	G	T	T			.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.											.																											.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																											.															.
Query SS confidence																											.															.
Query Sequence		Q	L	P	L	N	F	Y	Q	I	Q	T	K	F	R	D	E	V	R	P	R	F	G	V	M	R	.	S	R	E	F	L	M	K	D	A	Y	S	F	H	T	.	S	Q	E	S	L	Q	E	T	Y	D	A	M	Y	A	A	Y	S	K	I	F	S	R	M	G	L	D	F	R	A	V	Q	A	D	T	G	S	I	G	G
Query Conservation																											.															.
Alig confidence		.	.	.	.													.						.	.		.															.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.													.						.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	R	V	Y	E	I	A	P	I	F	R	A	E	.	E	H	N	T	T	.	.	R	H	L	N	E	A	W	S	I	D	S	E	M	A	F	I	E	D	E	E	E	V	M	S	F	L	E	R	L	V	A	H	A	I	N	Y	V	R	E	H	N	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.													.	S	S			S	.	.	S			S											S		S	S																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.													.						.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						205	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	H	E	F	Q	V	L	A	Q	S	G	E	D	D	V	V	F	S	D	T	S	D	Y	A	A	N	I	E	L	A	E	A	I	A	P	K	E	P	R	A	A	A	T	Q	E	M	T	L	V	D	T	P	N	A	K	T	I	A	E	L	V	E	Q	F	N	L	P	I	E	K	T	V	K	T	L	L	V	K
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	G	S	S	F	P	Q	V	A	L	L	V	R	G	D	H	E	L	N	E	V	K	A	E	K	L	P	Q	V	A	S	P	L	T	F	A	T	E	E	E	I	R	A	V	V	K	A	G	P	G	S	L	G	P	V	N	M	P	I	P	V	V	I	D	R	T	V	A	A	M	S	D	F	A	A	G	A	N
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	L	D	I	L	N	F	E	L	E	E	P	K	L	P	F	P	R	V	S	Y	D	K	A	L	E	I	L	G	D	L	G	K	E	I	P	W	G	E	D	I	D	T	E	G	E	R	L	L	G	K	Y	M	M	E	N	E	N	A	P	L	Y	F	L	Y	Q	Y	P	S	E	A	K	P	F	Y	I	M	K	Y
Template Known Secondary structure		.					T	T								S	S																T	T					T	T	S																					S						S		B	G	G	G	S		T	T	B
Template Predicted Secondary structure		.
Template SS confidence
			265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		365	.	.					.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		I	D	G	.	.	.	.	K	H	Y	F	G	I	N	W	D	R	D	V	A	T	P	E	V	A	D	I	R	N	V	V	A	G	D	P	S	P	D	G	Q	G	R	L	L	I	K	R	G	I	E	V	G	H	I	F	Q	L	G	T	K	Y	S	E	A	L	K	A	S	V	Q	G	E	D	G	R	N	Q	I	L	T
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		D	N	K	P	E	I	C	R	A	F	D	L	E	Y	R	G	V	E	I	S	S	G	G	Q	R	E	H	R	H	D	I	L	V	E	Q	I	K	E	K	G	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	S	F	E	F	.	.	.	.	.	Y	L	K	A	F	R	Y	G	M	P	P	H
Template Known Secondary structure		T	T						S							T	T									B														T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G			.	.	.	.	.				T	T	S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.																.	.	.	.	390	.						.	.	.	.	.	.	.	.	400	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	C	Y	G	I	G	V	T	R	V	V	A	A	A	I	E	Q	N	Y	D	E	R	G	I	V	W	P	D	A
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		G	G	.	F	G	L	G	A	E	R	L	I	K	Q	M	L	D	L	P	N	I	R	E	V	I	L	F	P	R	D
Template Known Secondary structure				.													T	T		S		G	G	G	G	S	S	S			B
Template Predicted Secondary structure				.
Template SS confidence
		404	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions