Job Description P16659 Confidence 96.06% Date Thu Jan 5 11:35:16 GMT 2012 Rank 106 Aligned Residues 130 % Identity 12% Template c3pcoD_ PDB info PDB header:ligase Chain: D: PDB Molecule:phenylalanyl-trna synthetase, beta chain; PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	I	V	R	E	E	M	N	N	A	G	A	I	E	V	S	M	P	V	V	Q	P	A	D	L	W	Q	E	S	G	R	W	E	Q	Y	G	P	E	L	L	R	F	V	D	R	G	E	R	P	F	V	L	G	P	T	H	E	E	V	I	T	D	L	I	R	N	E	L	S	S	Y	K	Q	L	P	L	N	F	Y
Query Conservation
Alig confidence																																													.	.	.																							.
Template Conservation																																													.	.	.																							.
Template Sequence		L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	G	V	E	A	L	L	L	P	S	P	I	.	.	.	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	.	Q	N	R	Q	Q	N	R	V	R	I	F
Template Known Secondary structure												S	S								S				T	T						S	T	T					B		S	S		S	.	.	.		G	G	G					S		S												.			T	T
Template Predicted Secondary structure																																													.	.	.																							.
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.				.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.	570
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		Q	I	Q	T	K	F	R	D	E	V	R	P	R	F	G	V	M	R	S	R	E	F	L	M	K	D	A	Y	S	F	H	T	S	Q	E	S	L	Q	E	.	.	.	.	.	.	T	Y	D	A	M	Y	A	A	Y	S	K	I	F	S	R	M	G	L
Query Conservation																																									.	.	.	.	.	.
Alig confidence																	.	.	.																						.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		E	S	G	L	R	F	V	P	D	T	Q	A	P	L	G	.	.	.	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K
Template Known Secondary structure											T	T	S	S	T	T	.	.	.													S	B	S	S	S	S		T	T	S				B													S	S	S	S	S	S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.				.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions