Job Description P16659 Confidence 98.38% Date Thu Jan 5 11:35:16 GMT 2012 Rank 94 Aligned Residues 140 % Identity 13% Template c3icaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain; PDBTitle: the crystal structure of the beta subunit of a phenylalanyl-trna2 synthetase from porphyromonas gingivalis w83 Resolution 2.44 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		L	K	K	V	E	N	I	V	R	E	E	M	N	N	A	G	A	I	E	V	S	M	P	V	V	Q	P	A	D	L	W	Q	E	S	G	R	W	E	Q	Y	G	P	E	L	L	R	F	V	D	R	G	E	R	P	F	.	V	L	G	P	T	H	E	E	V	I	T	D	L	I	R	N	E	L	S	S	Y	K	Q	L
Query Conservation																																																									.
Alig confidence																																					.	.																			.																				.
Template Conservation																																					.	.																																							.
Template Sequence		R	Y	K	W	Q	T	V	V	S	E	Q	L	V	G	A	G	F	N	E	I	L	N	N	S	L	T	A	G	S	Y	Y	E	G	L	K	.	.	S	H	P	R	E	X	A	V	E	L	X	N	P	L	S	Q	E	L	N	C	X	R	Q	T	L	L	F	G	G	L	E	T	L	S	H	N	L	R	.	R	K	H	L
Template Known Secondary structure																T	T								S				G	G	G	G	T	T		S	.	.	S	S		G	G	G			B		S	S		S		S	S	S					S		S														.	T	T		S
Template Predicted Secondary structure																																					.	.																																							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		P	L	N	F	Y	Q	I	Q	T	K	F	R	D	E	V	R	P	R	F	G	V	M	R	S	R	E	F	L	M	K	D	A	Y	S	F	H	T	S	Q	E	S	L	Q	E	T	.	.	.	.	Y	D	A	M	Y	A	A	Y	S	K	I	F	S	R	M	G	L	D	F
Query Conservation																																															.	.	.	.
Alig confidence																																															.	.	.	.
Template Conservation
Template Sequence		S	L	Y	L	F	E	W	G	K	C	Y	R	F	H	A	A	K	R	T	D	E	T	P	L	A	A	Y	A	E	D	D	R	L	G	I	W	I	C	G	Q	R	V	H	P	E	E	P	T	S	V	F	E	L	K	A	V	V	E	Q	V	L	C	R	V	G	I	E	T
Template Known Secondary structure																		S	S	S	S	S		S																	B							B																	T	T			G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions