Return to main results Retrieve Phyre Job Id

Job DescriptionP16659
Confidence95.94%DateThu Jan 5 11:35:16 GMT 2012
Rank107Aligned Residues146
% Identity15%Templatec2akwB_
PDB info PDB header:ligaseChain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain; PDBTitle: crystal structure of t.thermophilus phenylalanyl-trna synthetase2 complexed with p-cl-phenylalanine
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  PTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELS
Query Conservation 
 
  
   
   

      
  

 

 
   

   


       
    
       


               
Alig confidence 




















































...























Template Conservation               

  
   
  

 



               
 
 


...
 
 
 

 



 

     
  
Template Sequence  NRGVEAPYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPL. . . APEKAALRTHLFPGLVRVLKENLD
Template Known Secondary structure  GTTTTT




S
TTTT



S
B
SS
S...SGGGS
S
S
Template Predicted Secondary structure 





















...


Template SS confidence 















































































   485....490.........500.........510.........520.........530....... ..540.........550.........560.
 
   124.....130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure 























Query SS confidence 










































































Query Sequence  SYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQAD
Query Conservation 
   

 
 



  

 
 

  

 
 


 
 
   
         
   
      
   


    
   
Alig confidence 















....




..















































Template Conservation 
     
 




 

....   
 ..  
     
              
   

 

 

  
          
Template Sequence  LDRPERALLFEVGRVF. . . . REREE. . THLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFARLGLAFRVEAQA
Template Known Secondary structure  S

SB

....SSS..
BS

TTS


STT





Template Predicted Secondary structure 





....




..




















Template SS confidence 










































































   562.......570....... ..580.. .......590.........600.........610.........620.........630
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions