Job Description P0A8H8 Confidence 12.61% Date Thu Jan 5 11:07:52 GMT 2012 Rank 87 Aligned Residues 31 % Identity 29% Template c3b08H_ PDB info PDB header:signaling protein/metal binding protein Chain: H: PDB Molecule:ranbp-type and c3hc4-type zinc finger-containing protein 1; PDBTitle: crystal structure of the mouse hoil1-l-nzf in complex with linear di-2 ubiquitin Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	T	I	T	V	N	C	P	T	C	G	K	T	V	V	W	G	E	I	S	P	F	R	P	F	C	S	K	R	C	Q	L	I	D	L	G	E	W	A	A	E	E	K	R	I	P	S	S	G	D	L	S	E	S	D
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	P	T	R	P	G	C	E	M	C	C	R	A	.	.	.	.	.	.	.	.	.	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	Y	Q	I	P	A	S	Y	Q	P	D	E	E	E
Template Known Secondary structure				T	T		S	B		T	T	T			B	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.																	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions