Return to main results Retrieve Phyre Job Id

Job DescriptionP77247
Confidence97.97%DateWed Jan 25 15:21:10 GMT 2012
Rank124Aligned Residues169
% Identity18%Templated2bdua1
SCOP infoHAD-like HAD-like Pyrimidine 5'-nucleotidase (UMPH-1)
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.. .......30...... ...40.........50.........60....
Predicted Secondary structure 








....................
.....







Query SS confidence 












. . . . . . . . . . . . . . . . . . . .













. . . . .



























Query Sequence  AIFDMDGLLIDSE. . . . . . . . . . . . . . . . . . . . PLWDRAELDVMASL. . . . . GVDISRRNELPDTLGLRIDMVVDLWYAR
Query Conservation 



 



 
  ....................     
        .....
                           
Alig confidence 












....................













.....











..













Template Conservation 





 


     
    
   
        
        
   
 
 
    
   

   ..
 

      
   
Template Sequence  IITDFDXTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEEKFPY. . XVEWYTKSHGLLIE
Template Known Secondary structure 

TTTTB
STT


TSTTS
T
SSS
..
Template Predicted Secondary structure 

































..
Template SS confidence 















































































   46...50.........60.........70.........80.........90.........100......... 110.........120...
 
   65....70.........80.........90.........100.........110.........120.........130.........140..
Predicted Secondary structure 



































..
Query SS confidence 













































































. .
Query Sequence  QPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAE. .
Query Conservation                                                                                ..
Alig confidence 













..........





















































..
Template Conservation    
 
  
   
  ..........  
 

 
  

   
    


 




    

 

   
    

 



   
Template Sequence  QGIPKAKLKEIVAD. . . . . . . . . . SDVXLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFXD
Template Known Secondary structure 

BGGG..........S


B
BTT

TT


TT
Template Predicted Secondary structure 



..........





















Template SS confidence 















































































   124.....130....... ..140.........150.........160.........170.........180.........190...
 
   143......150.........160.........170.........180.... .....190
Predicted Secondary structure  ..............















.

Query SS confidence  . . . . . . . . . . . . . .









































.





Query Sequence  . . . . . . . . . . . . . . KLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAA. RMRSIV
Query Conservation  ..............                            


   

 

  
.
   
 
Alig confidence  ..............









































.





Template Conservation 

  
   

    
    
      
       
 
  






  

 

        

Template Sequence  FDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRXADGVANVEHIL
Template Known Secondary structure 
TTSB
SS


TT
TTTTT

SSSGGGGTTTT
S

S
Template Predicted Secondary structure 
































Template SS confidence 






























































   194.....200.........210.........220.........230.........240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions