Job Description P77247 Confidence 96.24% Date Wed Jan 25 15:21:10 GMT 2012 Rank 139 Aligned Residues 191 % Identity 20% Template c3j08A_ PDB info PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa Resolution 10.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.																													.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query Sequence		R	Q	I	L	A	A	I	F	D	M	D	G	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	E	P	L	W	D	R	A	E	L	D	V	M	A	S	L	G	V	D	I	S	R	R	N	E	L	P	D	T	L	G	L	R	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation
Template Sequence		E	K	V	T	A	V	I	F	D	K	T	G	T	L	T	K	G	K	P	E	V	T	D	L	V	P	L	N	G	D	E	R	E	L	L	R	L	A	A	I	A	E	R	R	S	E	H	P	I	A	E	A	I	V	K	K	A	L	E	H	G	I	E	L	G	E	P	E	K	V	E	V	I	A	G	E	G	V	V	A
Template Known Secondary structure		G	G								G	G	G	T	S	S	S	S										S	S	S														T	T			S													T	T					S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
					54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	I	D	M	V	V	D	L	W	Y	A	R	Q	P	W	N	G	P	S	R	Q	E	V	V	E	R	V	I	A	R	A	I	S	L	.	.	.	.	.	.	.	.	.	.	.	.	V	E	E	T	R	P	L	L	P	G	V	R	E	A	V	A	L	C	K	E	Q	G	L	L	V	G	L	A	S	A	S	P
Query Conservation		.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	I	L	V	G	N	K	R	L	M	E	D	F	G	V	A	V	S	N	E	V	E	L	A	L	E	K	L	E	R	E	A	K	T	A	V	I	V	A	R	N	G	R	V	E	G	I	I	A	V	S	D	T	L	K	E	S	A	K	P	A	V	Q	E	L	K	R	M	G	I	K	V	G	M	I	T	G	D	N
Template Known Secondary structure		T	T												T	T																T	T	T									T	T													T	T	T											T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	M	L	E	K	V	L	T	M	F	D	L	R	D	S	F	D	A	L	A	S	A	E	K	L	P	Y	S	K	P	H	P	Q	V	Y	L	D	C	A	A	K	L	G	V	D	P	L	T	C	V	A	L	E	D	S	V	N	G	M	I	A	S	K	A	A	R	M	R	S	I	V	V	P	A	P	E	A	Q	N
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.																								.	.	.	.																			.	.	.							.
Template Conservation																.	.	.	.	.	.	.	.																								.	.	.	.																			.	.	.							.
Template Sequence		W	R	S	A	E	A	I	S	R	E	L	N	L	D	.	.	.	.	.	.	.	.	L	V	I	A	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	A	K	E	V	.	.	.	.	V	A	F	V	G	D	G	I	N	D	A	P	A	L	A	Q	A	D	.	.	.	L	G	I	A	V	G	.	S	G	S
Template Known Secondary structure													T		S	.	.	.	.	.	.	.	.					S			T	T										T	T	T			.	.	.	.							S	S	S								S	S	.	.	.							.			S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																								.	.	.	.																			.	.	.							.
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.									590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.					.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630				.	.	.	.	.	.		.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	R	F	V	L	A	D	V	K	L	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	V	E	S	G	D	I	V	L	I	R
Template Known Secondary structure				S	S			S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions