Job Description P77247 Confidence 97.21% Date Wed Jan 25 15:21:10 GMT 2012 Rank 132 Aligned Residues 159 % Identity 15% Template c3bwvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative 5'(3')-deoxyribonucleotidase; PDBTitle: crystal structure of deoxyribonucleotidase-like protein (np_764060.1)2 from staphylococcus epidermidis atcc 12228 at 1.55 a resolution Resolution 1.55 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	I	F	D	M	D	G	L	L	I	D	S	E	P	L	W	D	R	A	E	L	D	V	M	A	S	L	G	V	D	I	S	R	R	N	E	L	P	D	T	L	G	L	R	I	D	M	V	V	D	L	W	Y	A	R	Q	P	W	N	G	P	S	R	Q	E	V	V	E	R	V	I	A	R	A	I	S	L	V
Query Conservation
Alig confidence																										.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	A	I	D	X	D	E	V	L	A	D	T	L	G	A	V	V	K	A	V	N	E	.	.	.	R	A	D	L	N	I	K	X	E	S	L	N	G	K	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	X	D	I	L	K	E	P	G	F
Template Known Secondary structure									B	T	T	T	B													.	.	.		T	T					G	G	G	G	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T	T
Template Predicted Secondary structure																										.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																										.	.	.	.	.	50	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		E	E	T	R	P	L	L	P	G	V	R	E	A	V	A	L	C	K	E	Q	G	L	L	V	G	L	A	S	A	.	.	.	.	S	P	L	H	M	L	E	K	V	L	T	M	F	D	L	R	D	S	F	D	A	L	A	S	A	E	K	L	P	Y	S	K	P	H	P	Q	V	Y	L	D	C	A	A	K	L	G	V
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	N	L	D	V	X	P	H	A	Q	E	V	V	K	Q	L	N	E	H	Y	D	I	Y	I	A	T	A	A	X	D	V	P	T	S	F	H	D	K	Y	E	W	L	L	E	Y	F	P	F	L	D	P	Q	H	F	V	F	C	G	R	K	N	I	I	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S			B		T	T									T	T	T	S								S	S	S	S	G	G	G													T	T	S		G	G	G					S	S	G	G	G				S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	L	T	C	V	A	L	E	D	S	V	N	G	M	I	A	S	K	A	A	R	M	R	S	I	V	V	P	A	P	E	A	Q	N	D	P	R	F	V	L	A	D	V	K	L	S	S	L	T	E	L	T	A	K	D	L	L
Query Conservation
Alig confidence		.	.	.	.	.																		.	.	.												.	.	.	.													.	.
Template Conservation		.	.	.	.	.																		.	.	.												.	.	.	.													.	.
Template Sequence		.	.	.	.	.	Y	L	I	D	D	N	P	K	Q	L	E	I	F	E	G	K	S	.	.	.	I	X	F	T	A	S	H	N	V	Y	E	.	.	.	.	H	R	F	E	R	V	S	G	W	R	D	V	.	.	K	N	Y	F
Template Known Secondary structure		.	.	.	.	.					S						T	T		S	S			.	.	.						G	G	G	T	T		.	.	.	.		S	S					S					.	.
Template Predicted Secondary structure		.	.	.	.	.																		.	.	.												.	.	.	.													.	.
Template SS confidence
							131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions