Job Description P77247 Confidence 99.26% Date Wed Jan 25 15:21:10 GMT 2012 Rank 84 Aligned Residues 183 % Identity 14% Template c2i7dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ Resolution 1.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	F	D	M	D	G	L	L	I	D	S	E	P	L	W	D	R	A	E	L	D	V	M	A	S	L	G	V	D	I	S	R	R	N	E	L	P	D	T	L	G	L	R	I	D	M	V	V	D	L	W	Y	A	R	Q	P	W	N	G	P	S	R	Q	E	V	V	E	R	V	I	A	R	A	I	S	L	V	E	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	D	M	D	G	V	L	A	D	F	E	A	G	L	L	R	G	F	R	R	R	F	P	E	E	P	H	V	P	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	F	L	A	R	E	Q	Y	R	A	L	R	P	D	L	A	D	K	V	A	S	V	Y	E	A	P	G	F	F	L
Template Known Secondary structure						S	B	T	T	T	B														S	T	T	S					G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S											T	T										T	S	T	T	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																			.																									.
Query SS confidence																			.																									.
Query Sequence		T	R	P	L	L	P	G	V	R	E	A	V	A	L	C	K	E	.	Q	G	L	L	V	G	L	A	S	A	S	P	L	H	M	L	E	K	V	L	T	M	F	D	.	L	R	D	S	F	D	A	L	A	S	A	E	K	L	P	Y	S	K	P	H	P	Q	V	Y	L	D	C	A	A	K	L	G	V	D	P	L	T
Query Conservation																			.																									.
Alig confidence																			.																									.						.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		D	L	E	P	I	P	G	A	L	D	A	V	R	E	M	N	D	L	P	D	T	Q	V	F	I	C	T	S	P	L	L	K	Y	H	H	C	V	G	E	K	Y	R	W	V	E	Q	H	L	.	.	.	.	.	.	.	.	.	.	.	G	P	Q	F	V	E	R	I	I	L	T	R	D	K	T	V	V	L	G	D	.
Template Known Secondary structure		T			B		T	T											S	T	T											S	S		T	T	T													.	.	.	.	.	.	.	.	.	.	.						T	T					S		G	G	G	S			S	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	A	L	E	D	S	V	N	G	M	I	A	S	K	A	A	R	M	R	S	I	V	V	P	A	P	E	A	Q	N	D	P	R	F	V	L	A	D	V	K	L	S	S	L	T	E	L	T	A	K	D	L	L
Query Conservation
Alig confidence		.																													.																			.
Template Conservation		.																													.																			.
Template Sequence		.	L	L	I	D	D	K	D	T	V	R	G	Q	E	E	T	P	S	W	E	H	I	L	F	T	C	C	H	N	.	R	H	L	V	L	P	P	T	R	R	R	L	L	S	W	S	D	N	.	W	R	E	I	L
Template Known Secondary structure		.						S	S				S	S		S	S		S	S								G	G	G	.	T	T					T	T	S						T	T	S		.
Template Predicted Secondary structure		.																													.																			.
Template SS confidence
			141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions