Job Description P15030 Confidence 1.25% Date Thu Jan 5 11:34:15 GMT 2012 Rank 53 Aligned Residues 180 % Identity 9% Template c3lrcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:arginine/agmatine antiporter; PDBTitle: structure of e. coli adic (p1) Resolution 4.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	T	H	D	R	N	K	L	I	L	A	G	I	A	L	S	A	F	C	M	G	L	T	R	I	T	L	L	L	A	E	D	H	A	Y	G	I	F	Y	W	L	A	G	G	V	S	H	A	R	W	Q	D	V	W	Q	L	L	P	V	V	V	T	A	V	P	V	V	L	L	L	A	N	Q	L	N	L	L	N	L
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		G	V	V	K	N	P	K	R	N	V	P	I	A	T	I	G	G	V	L	I	A	A	V	C	Y	V	L	S	T	T	A	I	M	G	.	.	.	.	.	.	.	.	M	I	P	N	T	A	G	A	I	V	S	F	C	A	A	A	G	C	L	G	S	L	G	G	W	T	L	L	A	G	Q	T	A	K	A	A	A	D
Template Known Secondary structure		G	G	S	S	S																								T	T				S	.	.	.	.	.	.	.	.						T										T																T	T	S	S	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.													.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	S	T	A	H	T	L	G	.	.	.	.	.	V	N	L	T	R	L	R	L	V	I	N	M	L	V	L	L	L	V	G	A	C	.	.	.	.	.	.	.	.	.	.	.	.	V	S	V	A	G	P	V	A	F	I	G	L	L	V	P	H	L	A	R	F	W	A	G	F	D	Q	R	N	V	L	P	V	S
Query Conservation											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	L	F	P	P	I	F	A	R	V	N	K	A	G	T	P	V	A	G	L	I	I	V	G	I	L	M	T	I	F	Q	L	S	S	I	S	P	N	A	T	K	E	F	G	L	V	S	S	V	S	V	I	F	T	L	V	P	Y	L	Y	T	C	A	A	L	L	L	L	G	H	G	H	F	G	K	A	R	P	A
Template Known Secondary structure		S	S		S									S	S	S	S																	T	T	S	S	S		S	S	S	S	S			S	S	T	T						T	T													T		T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	L	G	A	T	L	M	L	L	A	D	V	L	A	R	A	L	A	F	P	G	D	L	P	A	G	A	V	L	A	L	I	G	S	P	C	F	V	W	L	V	R	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	A	V	T	T	I	A	F	L	Y	C	I	W	A	V	V	G	S	G	A	K	E	V	M	W	S	F	V	T	L	M	V	I	T	A	M	Y	A	L	N	Y	N	R	L
Template Known Secondary structure																			S	S																		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions