Job Description P15030 Confidence 100.00% Date Thu Jan 5 11:34:15 GMT 2012 Rank 2 Aligned Residues 305 % Identity 30% Template c2nq2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	W	G	L	P	V	A	A	L	I	I	I	F	W	L	S	L	F	C	Y	S	A	I	P	V	S	G	A	D	A	T	R	A	L	L	P	G	H	T	P	T	L	P	E	A	L	V	Q	N	L	R	L	P	R	S	L	V	A	V	L	I	G	A	S	L	A	L	A	G	T	L	L	Q	T	L	T	H	N
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	K	I	L	F	G	L	T	L	L	L	V	I	T	A	V	I	S	L	G	I	G	R	Y	S	L	S	V	P	Q	I	.	.	.	.	.	.	.	.	.	D	P	V	Q	Q	Q	V	I	F	Q	V	R	L	P	R	I	L	T	A	L	C	V	G	A	G	L	A	L	S	G	V	V	L	Q	G	I	F	R	N
Template Known Secondary structure																					T	T	S	S	T	T			S	S				.	.	.	.	.	.	.	.	.											T																										T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	A	S	P	S	L	L	G	I	N	S	G	A	A	L	A	M	A	L	T	S	A	L	S	P	T	P	I	A	G	Y	S	L	S	F	I	A	A	C	G	G	G	V	S	W	L	L	V	M	T	A	G	G	G	F	R	H	T	H	D	R	N	K	L	I	L	A	G	I	A	L	S	A	F	C	M	G	L	T
Query Conservation
Alig confidence																															.	.	.																						.	.	.	.	.
Template Conservation																															.	.	.																						.	.	.	.	.
Template Sequence		P	L	V	N	P	H	I	I	G	V	T	S	G	S	A	F	G	G	T	L	A	I	F	F	G	F	S	L	Y	.	.	.	G	L	F	T	S	T	I	L	F	G	F	G	T	L	A	L	V	F	L	F	S	.	.	.	.	.	F	K	S	L	L	M	L	I	L	I	G	M	I	L	S	G	L	F	S	A	L	V
Template Known Secondary structure		T	T			T	T	T	T	S															T	T					.	.	.																						.	.	.	.	.	T
Template Predicted Secondary structure																															.	.	.																						.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		168	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		R	I	T	L	L	L	A	E	.	.	D	H	A	Y	G	I	F	Y	W	L	A	G	G	V	S	H	A	R	W	Q	D	V	W	Q	L	L	P	V	V	V	T	A	V	P	V	V	L	L	L	A	N	Q	L	N	L	L	N	L	S	D	S	T	A	H	T	L	G	V	N	L	T	R	L	R	L	V	I	N	M	L
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		S	L	L	Q	Y	I	S	D	T	E	E	K	L	P	S	I	V	F	W	L	M	G	S	F	A	T	S	N	W	E	K	L	L	F	F	F	V	P	F	L	L	C	S	S	I	L	L	S	L	S	W	R	L	N	L	L	S	L	D	E	K	E	A	K	A	L	G	V	K	M	A	P	L	R	W	L	V	I	F	L
Template Known Secondary structure							S	S		T	T	T									T	T			S	T	T																							T	T	T	G	G	G	G	G	G	S								T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	L	V	G	A	C	V	S	V	A	G	P	V	A	F	I	G	L	L	V	P	H	L	A	R	F	W	A	G	F	D	Q	R	N	V	L	P	V	S	M	L	L	G	A	T	L	M	L	L	A	D	V	L	A	R	A	L	A	F	P	G	D	L	P	A	G	A	V	L	A	L	I	G	S	P	C	F	V
Query Conservation
Alig confidence																																																													.
Template Conservation																																																													.
Template Sequence		S	G	S	L	V	A	C	Q	V	A	I	S	G	S	I	G	W	V	G	L	I	I	P	H	L	S	R	M	L	V	G	A	N	H	Q	S	L	L	P	C	T	M	L	V	G	A	T	Y	M	L	L	V	D	N	V	A	R	S	L	.	S	D	A	E	I	P	I	S	I	L	T	A	L	I	G	A	P	L	F	G
Template Known Secondary structure																		S	S	T	T												S																											S	.		S	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		326	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	V	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	V	Y	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions