|   |
459 | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | F | D | L | F | H | A | Y | T | V | D | E | H | T | I | R | V | M | L | K | L | E | S | F | A | S | E | E | T | R | Q | R | H | P | L | C | V | D | V | W | P | R | L | P | S | T | E | L | I | F | I | A | A | L | F | H | D | I | A | K | G | R | G | G | D | H | S | I | L | G | A | Q | D | V | V | H | F | A | E | L |
Query Conservation |   |
|   |
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   | . | . | . |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|   |   | . |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
H | D | T | T | G | H | D | I | . |
. |
. |
A | H | V | E | R | V | Y | N | N | A | C | Y | I | A | K | R | E | N | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | D | T | L | V | I | E | L | S | S | L | L | H | D | T | V | D | S | . |
K | L | T | D | E | I | L | A | Y | D | Q | L | K | Q | F | L | S | T |
Template Known Secondary structure |   |
T |
| S | S |
|  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | S |
|
|  |  |  |  |  |  |  |  |  | T | T | T | T |
|
| . | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | |
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
539 | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | L | N | S | R | E | T | Q | L | V | A | W | L | V | R | Q | H |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
L | D | L | S | S | E | I | S | Q | Q | V | L | Y | I | I | K | H | X |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |