Job Description P27249 Confidence 99.68% Date Thu Jan 5 11:43:29 GMT 2012 Rank 10 Aligned Residues 210 % Identity 15% Template d1vfga1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 2.80

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		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	L	R	D	E	T	L	F	M	R	Q	P	E	A	I	L	R	M	F	Y	T	M	V	H	N	S	A	I	T	G	I	Y	S	T	T	L	R	Q	L	R	H	A	R	R	H	L	Q	Q	P	L	C	N	I	P	E	A	R	K	L	F	L	S	I	L	R	H	P	G	A	V	R	R	G	L	L	P	M	H
Query Conservation
Alig confidence																															.	.																																									.
Template Conservation																															.	.																																									.
Template Sequence		V	I	R	V	L	H	P	V	S	F	I	E	D	P	V	R	I	L	R	A	L	R	F	A	G	R	L	N	F	.	.	K	L	S	R	S	T	E	K	L	L	K	Q	A	V	N	L	G	L	L	K	E	A	P	R	G	R	L	I	N	E	I	K	L	A	L	R	E	D	R	F	.	L	E	I	L	E	L	Y	R
Template Known Secondary structure			B			S	S	T	T						T	T													T		.	.		B														T	T	G	G	G	T	S																S	S		.
Template Predicted Secondary structure																															.	.																																									.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	S	V	L	G	A	Y	M	P	Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	I	F	I	A	A	L	F	H	D	I	A	K	G
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	R	V	L	E	E	I	I	E	G	F	Q	W	N	E	K	V	L	Q	K	L	Y	A	L	R	K	V	V	D	W	H	A	L	E	F	S	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	D	Y	G	W	L	Y	L	L	I	L	I	S	N	L	D	Y	E
Template Known Secondary structure			T	T						S	T	T																									G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S			S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	G	D	H	S	I	L	G	A	Q	D	V	V	H	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H	L	L	M	S	V	T	A	Q	R	R	D	I	Q	D	P	E	V	I	K	Q	F	A	E	E	V	Q	T	E	N	R	L	R	Y	L	V	C	L	T	V	A	D	I	C
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		R	G	.	.	.	.	.	.	.	.	.	.	.	K	H	F	L	E	E	M	S	A	P	S	W	V	R	E	T	Y	K	F	M	K	F	K	L	G	S	L	K	E	E	L	K	K	A	K	E	N	Y	E	.	.	.	.	.	V	Y	R	L	L	K	P	L	H	T	S	V	L	L	L	L	M	L	E	E	E	L	K
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	.	.	.	.							T	T																								T	T		S	S	S	T		.	.	.	.	.				T	T	G	G	G	G	T							T	T	S	G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
		272	.												.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	N	E	T	L	W	N	S	W	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	K	L	Y	L	E	K	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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