|   |
434 | . | . | . | . | . | 440 | . | . | . | . | . | . | . | |
. | . | 450 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | |
|
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  | . |
|
|
| . | . | . | . | . | . |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | L | P | M | H | R | H | S | V | L | G | A | Y | . |
M | P | Q | . |
. |
. |
. |
. |
. |
W | S | H | I | V | G | Q | M | Q | . |
. |
F | D | L | F | H | A | Y | T | V | D | E | H | T | I | R | V | M | L | K | L | E | S | F | A | S | E | E | T | R | Q | R | H | P | L | C | V | D | V | W | P | R | L | P | S | T |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|
|
|   |   |   | . |
|
|
| . | . | . | . | . | . |   |   |   |
|   |   |   |   |
| . | . |   |
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   | . | . | . |   |
|
|   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . |
Template Sequence |   |
V | F | E | L | L | T | R | H | N | L | I | S | R | F | K | I | P | T | V | F | L | M | S | F | L | D | A | L | E | T | G | Y | G | K | Y | K | N | P | Y | H | N | Q | . |
. |
. |
I | H | A | A | D | V | T | Q | T | V | H | F | L | L | R | T | G | M | V | H | C | L | S | E | I | E | L | L | . |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| S | S | S | S |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | S | G | G | G | G | S |
|  |  |  |  |  | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | |
|
|
|
|
|
|
  |
  |   |
505 | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | |
|
|
. | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | I | F | I | A | A | L | F | H | D | I | A | K | G | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | D | H | S | I | L | . |
. |
. |
G | A | Q | D | V | V | H | F | A | E | L | H | G | L | . |
. |
. |
. |
. |
. |
N | S | R | E | T | Q | L | V | A | W | L | V | R | Q | H | L | L | M |
Query Conservation |   |
  |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|   |   | . | . | . |
|
|   |   |
|   |   |   |   |   |
|
|   |
| . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
Template Sequence |   |
. |
A | I | I | F | A | A | A | I | H | D | Y | E | H | T | G | T | T | N | S | F | H | I | Q | T | K | S | E | C | A | I | V | Y | N | D | R | S | V | L | E | N | H | H | I | S | S | V | F | R | L | M | Q | D | D | E | M | N | I | F | I | N | L | T | K | D | E | F | V | E | L | R | A | L | V | I | E | M | V | L | A |
Template Known Secondary structure |   |
. |  |  |  |  |  |  |  |  | T | T | T | T |
|
| S | S |
|  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | G | G | G |
| T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
  |
  |   |
560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | |
|
. | . | . | . | . | . | . | . | . | 600 | . | . | . | . | |
|
. | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | T | A | Q | R | R | D | I | Q | D | P | E | V | I | K | Q | F | A | E | E | V | Q | T | E | N | R | L | R | Y | L | . |
. |
V | C | L | T | V | A | D | I | C | A | T | N | E | T | . |
. |
L | W | N | S | W | K | Q | S | L | L | R | E | L | Y | F | A | T | E | K | Q | L | R | R | G | M | Q | N | T | P | D | M |
Query Conservation |   |
|   |   |
|   |
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
| . | . |   |
|
|
|   |
|
|   |   |
|
|
|
|   | . | . |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
| . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
T | D | M | S | C | H | . |
. |
. |
. |
. |
F | Q | Q | V | K | T | M | K | T | A | L | Q | Q | R | I | D | K | P | K | A | L | S | L | L | L | H | A | A | D | I | S | H | P | T | K | Q | W | L | V | H | S | R | W | T | K | A | L | M | E | E | F | F | R | Q | G | D | K | E | A | E | L | G | L | P | R | T | S | T | L |
Template Known Secondary structure |   |
T |
| G | G | G |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
334 | . | . | . | . | . | |
|
|
|
|
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . |
  |
  |   |
636 | . | . | . | 640 |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
R | E | R | V | R |
Query Conservation |   |
  |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
Template Sequence |   |
V | A | Q | S | Q |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
417 | . | . | 420 | . |
  |