Job Description P27249 Confidence 99.32% Date Thu Jan 5 11:43:29 GMT 2012 Rank 14 Aligned Residues 140 % Identity 13% Template d1ou5a1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 3.40

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		D	E	T	L	F	M	R	Q	P	E	A	I	L	R	M	F	Y	T	M	V	H	N	S	A	I	T	G	I	.	.	.	Y	S	T	T	L	R	Q	L	R	H	A	R	R	H	L	Q	Q	P	L	C	N	I	P	E	A	R	K	L	F	L	S	I	L	R	H	P	G	A	V	R	R	G	L	L	P	M	H	R	H
Query Conservation																														.	.	.
Alig confidence																										.	.			.	.	.																			.	.																			.
Template Conservation																										.	.																								.	.																			.
Template Sequence		A	K	Q	R	I	Q	E	D	Y	L	R	I	L	R	Y	F	R	F	Y	G	R	I	V	D	.	.	K	P	G	D	H	D	P	E	T	L	E	A	I	A	E	N	A	K	G	L	A	G	I	.	.	S	G	E	R	I	W	V	E	L	K	K	I	L	V	G	N	H	V	.	N	H	L	I	H	L	I	Y	D	L
Template Known Secondary structure		T	T	T	T	S	S	S		T	T												S		S	.	.	S	S	S													S		T	T	G	G	G	S	.	.		S												T	S	T	T		.										T
Template Predicted Secondary structure																										.	.																								.	.																			.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	G	A	Y	M	P	Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	I	F	I	A	A	L	F	H	D	I	A	K	G	R	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		D	V	A	P	Y	I	G	L	P	.	.	.	.	.	.	.	.	.	.	.	A	N	A	S	L	E	E	F	D	K	V	S	K	N	V	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	P	K	P	V	T	L	L	A	S	L	F	K	V	Q	D	D	V	.	.
Template Known Secondary structure		T		G	G	G	G	T			.	.	.	.	.	.	.	.	.	.	.			S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									G	G	G			S	T	T	T	T	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.												.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.																							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	H	S	I	L	G	A	Q	D	V	V	H	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	K	L	D	L	R	L	K	I	A	K	E	E	K	N	L	G	L	F	I	V	K	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											T	T									T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions