Job Description P27249 Confidence 99.56% Date Thu Jan 5 11:43:29 GMT 2012 Rank 11 Aligned Residues 187 % Identity 15% Template d1miwa1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 3.00

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	M	R	Q	P	E	A	I	L	R	M	F	Y	T	M	V	H	N	S	A	I	T	G	I	Y	S	T	T	L	R	Q	L	R	H	A	R	R	H	L	Q	Q	P	L	C	N	I	P	E	A	R	K	L	F	L	S	I	L	R	H	P	G	A	V	R	R	G	L	L	P	M	H	R	H	S	V	L	G	A	Y
Query Conservation
Alig confidence																							.	.																								.	.																.															.
Template Conservation																							.	.																								.	.																.															.
Template Sequence		R	F	R	E	D	A	L	R	X	X	R	A	V	R	F	V	S	E	L	G	F	.	.	A	L	A	P	D	T	E	Q	A	I	V	Q	N	A	P	L	L	A	H	I	S	V	E	.	.	R	X	T	X	E	X	E	K	L	L	G	G	P	F	A	.	A	R	A	L	P	L	L	A	E	T	G	L	N	A	.	Y
Template Known Secondary structure							T																.	.		B												G	G	G	G	G	G	S				.	.											T	S	S	S		.										S	T	T	T	T	.	S
Template Predicted Secondary structure																							.	.																								.	.																.															.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.		.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	I	F	I	A	A	L	F	H	D	I	A	K	G	R	G	G	D	H	S	I	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		L	P	G	L	A	G	K	E	K	Q	L	R	L	A	A	A	Y	R	W	P	W	L	A	A	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	W	A	L	L	C	H	A	L	G	V	Q	E	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T		S	S								G	G	G	S		G	G	G			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S		.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																																		250	.	.	.	.	.	.	.	.	.	260	.	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	Q	D	V	V	H	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H	L	L	M	S	V	T	A	Q	R	R	D	I	Q	D	P	E	V	I	K	Q	F	A	E	E	V	Q	T	E	N	R	L	R	Y	L	V	C	L	T	V	A	D	I	C	A	T	N	E	T	L	W	N
Query Conservation
Alig confidence		.	.	.	.																														.	.	.	.														.	.	.	.	.
Template Conservation		.	.	.	.																														.	.	.	.														.	.	.	.	.
Template Sequence		.	.	.	.	S	R	P	F	L	R	A	W	K	L	P	N	K	V	V	D	E	A	G	A	I	L	T	A	L	A	D	I	P	.	.	.	.	R	P	E	A	W	T	N	E	Q	L	F	S	A	.	.	.	.	.	G	L	E	R	A	L	S	V	E	T	V	R	A	A	F	T	G	A	P	P	G	P	W	H	E
Template Known Secondary structure		.	.	.	.								T	T																					.	.	.	.	S	G	G	G										.	.	.	.	.																				S
Template Predicted Secondary structure		.	.	.	.																														.	.	.	.														.	.	.	.	.
Template SS confidence
						264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		608	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	K	Q	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	R	R	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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