Job Description P27249 Confidence 45.20% Date Thu Jan 5 11:43:29 GMT 2012 Rank 144 Aligned Residues 67 % Identity 12% Template c8iczA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar) Resolution 3.10 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		I	E	A	R	T	E	F	I	D	Q	L	L	Q	R	L	W	I	E	A	G	F	S	Q	I	A	D	L	A	L	V	A	V	G	G	Y	G	R	G	E	L	H	P	L	S	D	V	D	L	L	I	L	S	R	K	.	.	K	L	P	D	D	Q	A	Q	K	V	G	E	L	L	T	L	L	W	D	V	K	L
Query Conservation																																																								.	.
Alig confidence																	.	.	.	.	.	.	.	.													.																			.	.
Template Conservation																	.	.	.	.	.	.	.	.													.
Template Sequence		M	L	Q	M	Q	D	I	V	L	N	E	V	K	K	V	.	.	.	.	.	.	.	.	D	S	E	Y	I	A	T	V	C	G	S	F	.	R	R	G	A	E	S	S	G	D	M	D	V	L	L	T	H	P	S	F	T	S	E	S	T	K	Q	P	K	L	L	H	Q	V	V	E	Q	L	Q	K	V	H	F
Template Known Secondary structure																	.	.	.	.	.	.	.	.		T	T							S	T	T	.	T	T			S			S	S								T	T			S	S	S																	T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.													.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions