Job Description P27249 Confidence 96.63% Date Thu Jan 5 11:43:29 GMT 2012 Rank 60 Aligned Residues 95 % Identity 20% Template c3u1nC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: structure of the catalytic core of human samhd1 Resolution 3.10 Å

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		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.							.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.								.	.	.	510	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																																											.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																																											.	.	.	.	.	.	.
Query Sequence		P	Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	.	.	.	.	.	.	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	.	.	.	.	.	.	.	I	F	I	A	A	L	F	H	D
Query Conservation																		.	.	.	.	.	.																																											.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	F	Q	R	L	R	Y	I	K	Q	L	G	G	G	Y	Y	V	F	P	G	A	S	H	N	R	F	E	H	S	L	G	V	G	Y	L	A	G	C	L	V	.	.	.	.	.	.	.	.	.	.	.	H	A	L	G	E	K	Q	P	E	L	Q	I	S	E	R	D	V	L	C	V	Q	I	A	G	L	C	H	D
Template Known Secondary structure						G	G	G	G	S	B	T	T	G	G	G	T	T	T		T	T				B																	.	.	.	.	.	.	.	.	.	.	.								G	G	G																	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.												180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		516	.	.	.	520	.	.																		.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540											.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	K	G	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	S	I	L	G	A	Q	D	V	V	H	F	A	E	L	H	G	.	.	.	.	.	.	.	.	.	.	L	N	S	R	E	T	Q	L	V	A	W	L	V	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	H	G	P	F	S	H	X	F	D	G	R	F	I	P	L	A	R	P	E	V	K	W	T	H	E	Q	G	S	V	X	X	F	E	H	L	I	N	S	N	G	I	K	P	V	X	E	Q	Y	G	L	I	P	E	E	D	I	C	F	I	K	E	Q	I	V
Template Known Secondary structure		T	T		B	T	T	B						T							T	T	S																			T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions