Job Description P27249 Confidence 27.32% Date Thu Jan 5 11:43:29 GMT 2012 Rank 157 Aligned Residues 62 % Identity 15% Template c3pq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:poly(a) rna polymerase; PDBTitle: crystal structure of human mitochondrial poly(a) polymerase (papd1) Resolution 3.10 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	Q	R	L	W	I	E	A	G	F	S	Q	I	A	D	L	A	L	V	A	V	G	G	Y	G	R	G	E	L	H	P	L	S	D	V	D	L	L	I	L	S	R	K	K	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	Q	A	Q	K	V	G	E	L	L	T	L	L
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	T	C	S	L	I	E	D	X	A	A	A	Y	F	P	D	C	I	V	R	P	F	G	S	S	V	N	T	F	G	K	L	G	C	D	L	D	X	F	L	D	L	D	S	A	H	K	I	S	G	X	E	F	Q	V	K	N	V	P	S	E	R	I	A	T	Q	K	I	L	S	V	L	G	E	C	L
Template Known Secondary structure													T	T	T	S	T	T							G	G	G	T	S	S			B	T	T													S													S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions