Job Description P27249 Confidence 96.69% Date Thu Jan 5 11:43:29 GMT 2012 Rank 57 Aligned Residues 152 % Identity 17% Template c3memA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution Resolution 2.25 Å

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		390	.	.	.	.	.	.	.	.	.	400	.	.								.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.									.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.			.	450	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																					.	.
Query SS confidence															.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																					.	.
Query Sequence		T	G	I	Y	S	T	T	L	R	Q	L	R	H	.	.	.	.	.	.	.	A	R	R	H	L	Q	Q	P	L	C	N	I	P	E	A	R	K	L	F	L	S	I	L	R	H	P	.	.	.	.	.	.	.	.	G	A	V	R	R	G	L	L	P	M	H	R	H	S	V	L	G	A	Y	M	.	.	P	Q	W	S
Query Conservation															.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																					.	.
Alig confidence															.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		L	P	P	L	P	E	T	A	Q	R	I	I	H	L	R	V	N	P	N	A	V	X	G	D	L	V	D	V	V	E	S	D	P	S	L	A	A	Q	V	V	S	W	A	S	S	S	F	Y	A	A	A	G	R	V	H	S	V	H	D	A	V	S	R	V	L	G	F	D	L	V	X	N	L	A	X	G	L	A	L	G
Template Known Secondary structure																				S													S													S	T	T	T	G	G	G												T	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	I	F	I	A	A	L	F	H	D	I	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	L	K	H	P	Q	D	H	P	D	G	Y	V	D	Y	W	Q	Q	A	I	W	Q	A	Q	S	A	G	I	L	A	S	X	X	P	R	G	Q	R	.	.	.	.	.	.	.	.	.	.	P	L	F	G	L	A	Y	L	A	G	L	L	H	N	F	G	H	L	V	L	A	Q	V	F	P	P	H	F	K	L	V
Template Known Secondary structure		T	T	S				S				T	T	S																					S		G	G	G		.	.	.	.	.	.	.	.	.	.													T	T	T									S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
								519	520	.	.	.	.	.	.	.									.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure		.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	R	G	G	D	H	S	I	L	.	.	.	.	.	.	.	.	G	A	Q	D	V	V	H	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W
Query Conservation		.	.	.	.	.	.										.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	R	S	L	E	V	S	P	H	I	D	S	S	V	I	E	H	Y	L	L	G	I	T	R	E	Q	I	A	A	Q	L	X	E	N	W	G	X	P	D	E	V	T	L	A	I	R	Y
Template Known Secondary structure									T	T	S											S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions