Job Description P27249 Confidence 100.00% Date Thu Jan 5 11:43:29 GMT 2012 Rank 2 Aligned Residues 296 % Identity 17% Template c3k7dA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamate-ammonia-ligase adenylyltransferase; PDBTitle: c-terminal (adenylylation) domain of e.coli glutamine synthetase2 adenylyltransferase Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.																										.	.	.
Query SS confidence																																																					.																										.	.	.
Query Sequence		L	P	E	Q	Y	A	N	T	A	L	P	T	L	P	G	Q	P	Q	N	P	C	V	W	P	R	D	E	L	T	V	G	G	I	K	A	H	I	D	T	F	Q	R	W	L	G	D	A	F	D	N	G	.	I	S	A	E	Q	L	I	E	A	R	T	E	F	I	D	Q	L	L	Q	R	L	W	I	E	A	.	.	.
Query Conservation																																																					.																										.	.	.
Alig confidence																																																					.																										.	.	.
Template Conservation
Template Sequence		L	Y	Q	P	T	A	T	D	A	Y	R	D	E	L	R	Q	Y	L	L	R	V	P	E	D	D	E	E	Q	Q	L	E	A	L	R	Q	F	K	Q	A	Q	L	L	R	I	A	A	A	D	I	A	G	T	L	P	V	M	K	V	S	D	H	L	T	W	L	A	E	A	M	I	D	A	V	V	Q	Q	A	W	V	Q
Template Known Secondary structure			S	S				T	T										T	T	T	S		T	T																											T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.													.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	F	S	Q	I	A	D	L	A	L	V	A	V	G	G	Y	G	R	G	E	L	H	P	L	S	D	V	D	L	L	I	L	S	R	K	K	L	P	.	.	.	.	.	.	.	.	.	.	.	.	D	D	Q	A	Q	K	V	G	E	L	L	T	L	L	W	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		M	V	A	R	Y	G	K	P	N	H	L	N	E	R	E	G	R	G	F	A	V	V	G	Y	G	K	L	G	G	W	E	L	G	Y	S	S	D	L	D	L	I	F	L	H	D	C	P	M	D	A	M	T	D	G	E	R	E	I	D	G	R	Q	F	Y	L	R	L	A	Q	R	I	M	H	L	F	S	T	R	T	S
Template Known Secondary structure									B	G	G	G	T	T		S	S		S											T	T				T	T													T	T		B	B	S	S	S	S			B																				B	T
Template Predicted Secondary structure
Template SS confidence
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.
									133	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.							.	.	.	.																		.	.																																				.
Query SS confidence		.	.	.	.	.	.	.							.	.	.	.																		.	.																																				.
Query Sequence		.	.	.	.	.	.	.	D	V	K	L	E	V	.	.	.	.	G	H	S	V	R	T	L	E	E	C	M	L	E	G	L	S	D	.	.	L	T	V	A	T	N	L	I	E	S	R	L	L	I	G	D	V	A	L	F	L	E	L	Q	K	H	I	F	S	E	G	F	W	P	S	.	D	K	F	Y	A	A	K	V
Query Conservation		.	.	.	.	.	.	.							.	.	.	.																		.	.																																				.
Alig confidence		.	.	.	.	.	.	.							.	.	.	.																		.	.																																				.
Template Conservation
Template Sequence		S	G	I	L	Y	E	V	D	A	R	L	R	P	S	G	A	A	G	M	L	V	T	S	A	E	A	F	A	D	Y	Q	K	N	E	A	W	T	W	E	H	Q	A	L	V	R	A	R	V	V	Y	G	D	P	Q	L	T	A	H	F	D	A	V	R	R	E	I	M	T	L	P	R	E	G	K	T	L	Q	T	E	V
Template Known Secondary structure		T	B		S						T	T	S	T	T	G	G	G	S		S														T											T																							T	S
Template Predicted Secondary structure
Template SS confidence
		745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.													.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	Q	N	Q	R	H	Q	R	Y	H	G	T	S	Y	N	L	E	P	D	I	K	S	S	P	G	G	L	R	D	I	H	T	L	Q	W	V	A	R	R	H	F	G	.	.	.	.	.	.	.	.	.	.	.	.	A	T	S	L	D	E	M	V	G	F	G	F	L	T	S	A	E	R	A	E	L	N	E	C	L
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	M	R	E	K	M	R	A	H	L	G	N	K	H	R	D	R	F	D	I	K	A	D	E	G	G	I	T	D	I	E	F	I	T	Q	Y	L	V	L	R	Y	A	H	E	K	P	K	L	T	R	W	S	D	N	V	R	I	L	E	L	L	A	Q	N	D	I	M	E	E	Q	E	A	M	A	L	T	R	A	Y
Template Known Secondary structure												S	S				T	T				T	T	T	S	T	T	S																T	T	T		G	G	G	G	S			S											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		H	I	L	W	R	I	R	F	A	L	H	L	.	.	V	V	S	R	Y	D	N	R	L	L	F	D	R	Q	L	S	V	A	Q	R	L
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		T	T	L	R	D	E	L	H	H	L	A	L	Q	E	L	P	G	H	V	S	E	D	C	F	T	A	E	R	E	L	V	R	A	S	W
Template Known Secondary structure														T	T			S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		905	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions