 |
Job Description | P27249 | Confidence | 87.19% | Date | Thu Jan 5 11:43:29 GMT 2012 |
Rank | 110 | Aligned Residues | 31 |
% Identity | 23% | Template | c3jz0B_ |
PDB info |
PDB header:transferase/antibiotic | Chain: B: PDB Molecule:lincosamide nucleotidyltransferase; |
PDBTitle: linb complexed with clindamycin and ampcpp
|
Resolution | 2.00 Å |
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | V | A | V | G | G | Y | G | R | G | E | L | H | P | L | S | D | V | D | L | L | I | L | S | R | K | K | L | P | D |
Query Conservation |   |
|
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
A | C | M | M | Y | G | S | F | T | K | G | E | G | D | Q | Y | S | D | I | E | F | Y | I | F | L | K | H | S | I | T | S |
Template Known Secondary structure |   |
 |  |  |  |
| S | G | G | G | T | T |
|
|
| T | T |
|
|  |  |  |  |  |  |  |
| G | G | G | S | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|