Job Description P27249 Confidence 91.78% Date Thu Jan 5 11:43:29 GMT 2012 Rank 97 Aligned Residues 168 % Identity 14% Template c3ibjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: x-ray structure of pde2a Resolution 3.02 Å

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		434	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450							.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure																.				.	.	.	.	.	.																																																								.
Query SS confidence																.				.	.	.	.	.	.																																																								.
Query Sequence		G	L	L	P	M	H	R	H	S	V	L	G	A	Y	.	M	P	Q	.	.	.	.	.	.	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	.
Query Conservation																.				.	.	.	.	.	.																																																								.
Alig confidence																.				.	.	.	.	.	.																	.	.	.																.	.	.	.	.	.	.	.	.													.
Template Conservation																																										.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		I	L	S	M	L	Q	D	M	N	F	I	N	N	Y	K	I	D	C	P	T	L	A	R	F	C	L	M	V	K	K	G	Y	R	D	P	P	Y	H	N	W	.	.	.	M	H	A	F	S	V	S	H	F	C	Y	L	L	Y	K	.	.	.	.	.	.	.	.	.	N	L	E	L	T	N	Y	L	E	D	I	E	I
Template Known Secondary structure								T	T	T						T																T					S	S	S	S		.	.	.																.	.	.	.	.	.	.	.	.			T	G	G	G	T	S
Template Predicted Secondary structure																																										.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.				.	660	.	.	.	.	.	.	.	.	.	670	.	.	.										.	.	.	.	.	.	680	.	.	.	.	.	.
			506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.														.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540							.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		.	L	I	F	I	A	A	L	F	H	D	I	A	K	G	R	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	I	L	G	A	Q	D	V	V	H	F	A	E	L	H	G	.	.	.	.	.	.	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H	L	L	M	S	V	T	A	Q	R
Query Conservation		.																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	L	F	I	S	C	M	C	H	D	L	D	H	R	G	T	N	K	S	V	L	A	A	L	Y	S	S	E	G	S	V	M	E	R	H	H	F	A	Q	A	I	A	I	L	N	T	H	G	C	N	I	F	D	H	F	S	R	K	D	Y	Q	R	M	L	D	L	M	R	D	I	I	L	A	T	D	L	A	H	H
Template Known Secondary structure											T	T	T	T									G	G	G	T	T	T		S	S	S															T	S	T	T	T		T	T	S	S	S																			T
Template Predicted Secondary structure
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.									.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.			.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																						.	.
Query SS confidence																				.	.	.	.	.	.	.	.																						.	.
Query Sequence		R	D	I	Q	D	P	E	V	I	K	Q	F	A	E	E	V	Q	T	.	.	.	.	.	.	.	.	E	N	R	L	R	Y	L	V	C	L	T	V	A	D	I	C	A	T	N	E	T	.	.	L	W	N	S	W	K	Q	S	L	L	R	E	L	Y
Query Conservation																				.	.	.	.	.	.	.	.																						.	.
Alig confidence		.	.	.	.	.														.	.	.	.	.	.	.	.																						.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	R	I	F	K	D	L	Q	K	M	A	E	V	G	Y	D	R	N	N	K	Q	H	H	R	L	L	L	C	L	L	M	T	S	C	D	L	S	D	Q	T	K	G	W	K	T	T	R	K	I	A	E	L	I	Y	K	E	F	F
Template Known Secondary structure		.	.	.	.	.													S				S	S																		T	G	G	G	G	S																	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions