Job Description P27249 Confidence 93.70% Date Thu Jan 5 11:43:29 GMT 2012 Rank 83 Aligned Residues 108 % Identity 18% Template c3c66B_ PDB info PDB header:transferase Chain: B: PDB Molecule:poly(a) polymerase; PDBTitle: yeast poly(a) polymerase in complex with fip1 residues 80-105 Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	T	L	P	E	Q	Y	A	N	T	A	L	P	T	L	P	G	Q	P	Q	N	P	C	V	W	P	R	D	E	L	T	V	G	G	I	K	A	H	I	D	T	F	Q	R	W	L	G	D	A	F	D	N	G	I	S	A	E	Q	L	I	E	A	R	T	E	F	I	D	Q	L	L	Q	R	L	W	I	E	A	G
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	T	A	A	E	N	K	L	N	D	S	L	I	Q	E	L	K	K	E	G	S	F	E	T	E	Q	E	T	A	N	R	V	Q	V	L	K	I	L	Q	E	L	A	Q	R	F	V	Y	E	V	S	K	K	K	N	M	S	D	G	M	A	R	D	A	G	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					T	T		S																														T	T	T									T	B			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	Q	I	A	D	L	A	L	V	A	V	G	G	Y	G	R	G	E	L	H	P	L	S	D	V	D	L	L	I	L	S	R	K	K	L	P	D	D	Q	A	Q	K	V	G	E	L	L	T	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																.	.
Template Conservation		.	.	.	.	.	.	.	.																																.	.
Template Sequence		.	.	.	.	.	.	.	.	I	F	T	Y	G	S	Y	R	L	G	V	H	G	P	G	S	D	I	D	T	L	V	V	V	P	K	H	V	T	R	E	.	.	D	F	F	T	V	F	D	S	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.										T				S	S											T	T					.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																.	.
Template SS confidence
										84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions