 |
Job Description | P27249 | Confidence | 92.79% | Date | Thu Jan 5 11:43:29 GMT 2012 |
Rank | 89 | Aligned Residues | 73 |
% Identity | 23% | Template | c3bg2A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:dgtp triphosphohydrolase; |
PDBTitle: crystal structure of deoxyguanosinetriphosphate triphosphohydrolase2 from flavobacterium sp. med217
|
Resolution | 1.95 Å |
|
 |
  |   |
449 | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | |
. | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 510 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Q | W | S | H | I | V | G | Q | M | Q | F | D | L | F | . |
H | A | Y | T | V | D | E | H | T | I | R | V | M | L | K | L | E | S | F | A | S | E | E | T | R | Q | R | H | P | L | C | V | D | V | W | P | R | L | P | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | E | L | I | F | I | A | A | L | F | H | D |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |
|   |
|   |
| . |
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
Template Sequence |   |
A | P | F | R | S | L | Q | D | K | T | Q | V | I | P | T | D | F | V | H | T | R | L | T | H | S | L | E | V | S | V | V | G | R | S | L | G | R | . |
. |
. |
. |
. |
. |
. |
M | V | G | K | K | L | L | E | K | Y | P | H | L | E | Q | V | Y | G | Y | K | F | N | D | F | G | A | I | V | A | A | A | A | L | A | H | D |
Template Known Secondary structure |   |
 |  |  |  |  | G | G | G |
| B |
| S |
|
|
|
|
|
|
| B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | S | T |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
  |   |
516 | . | . | . | 520 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | K | G | R | G | G | D | H | S | I | L | G | A |
Query Conservation |   |
|
|
|
|   |   |   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
| . |
|
|
|
|   |
|
|   |
|
Template Sequence |   |
I | G | N | P | . |
P | F | G | H | S | G | E | K | A |
Template Known Secondary structure |   |
T | T |
|
| . | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
| . |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | |
. | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|