Job Description P27249 Confidence 93.03% Date Thu Jan 5 11:43:29 GMT 2012 Rank 86 Aligned Residues 183 % Identity 15% Template c2r8qA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:class i phosphodiesterase pdeb1; PDBTitle: structure of lmjpdeb1 in complex with ibmx Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		434	.	.	.	.	.	440	.	.	.	.	.	.	.								.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		G	L	L	P	M	H	R	H	S	V	L	G	A	Y	.	.	.	.	.	.	.	M	P	Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																				.	.	.																														.	.	.	.	.	.	.
Template Conservation																																										.	.	.																														.	.	.	.	.	.	.
Template Sequence		V	Y	N	L	L	W	N	S	G	L	P	E	K	F	G	C	R	E	Q	T	L	L	N	F	I	L	Q	C	R	R	R	Y	R	R	V	P	Y	H	N	F	.	.	.	Y	H	V	V	D	V	C	Q	T	L	H	T	Y	L	Y	T	G	K	A	S	E	L	L	T	E	L	E	C	Y	.	.	.	.	.	.	.	V
Template Known Secondary structure								T	T	S					T	T																T			S		S	S	S	S		.	.	.																T	S		G	G	G	G	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.				.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.								.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.																											.	.	.	.	.	.	530	.	.	.	.					.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		I	F	I	A	A	L	F	H	D	I	A	K	G	R	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	I	L	G	A	Q	D	V	V	H	.	.	.	.	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.				.	.
Template Conservation																																																															.	.
Template Sequence		L	L	V	T	A	L	V	H	D	L	D	H	M	G	V	N	N	S	F	Y	L	K	T	D	S	P	L	G	I	L	S	S	A	S	G	N	N	S	V	L	E	V	H	H	C	S	L	A	I	E	I	L	S	D	P	A	A	D	V	F	E	.	.	G	L	S	G	Q	D	V	A	Y	A	Y	R	A	L	I	D	C
Template Known Secondary structure									T	T	T	T			S									T	T											S																		T	S	T	T	T		T	T	T	.	.	T	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.			.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.									.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.			.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.																							.	.
Query SS confidence																												.	.	.	.	.	.	.	.																							.	.
Query Sequence		L	L	M	S	V	T	A	Q	R	R	D	I	Q	D	P	E	V	I	K	Q	F	A	E	E	V	Q	.	.	.	.	.	.	.	.	T	E	N	R	L	R	Y	L	V	C	L	T	V	A	D	I	C	A	T	N	E	T	.	.	L	W	N	S	W	K	Q	S	L	L	R	E	L	Y	F	A	T	E	K	Q	L	R
Query Conservation																												.	.	.	.	.	.	.	.																							.	.
Alig confidence											.	.	.	.	.													.	.	.	.	.	.	.	.																							.	.
Template Conservation											.	.	.	.	.
Template Sequence		V	L	A	T	D	M	A	K	H	.	.	.	.	.	A	D	A	L	S	R	F	T	E	L	A	T	S	G	F	E	K	D	N	D	T	H	R	R	L	V	M	E	T	L	I	K	A	G	D	V	S	N	V	T	K	P	F	E	T	S	R	M	W	A	M	A	V	T	E	E	F	Y	R	Q	G	D	M	E	K	E
Template Known Secondary structure				T	T		G	G	G		.	.	.	.	.																	T	T																		T	G	G	G	G	S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		792	.	.	.	.	.	.	.	800						.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.
		627	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	M	Q	N	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	V	E	V	L	P
Template Known Secondary structure		T	T					G
Template Predicted Secondary structure
Template SS confidence
		867	.	.	870	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions