Job Description P27249 Confidence 28.57% Date Thu Jan 5 11:43:29 GMT 2012 Rank 156 Aligned Residues 133 % Identity 16% Template c2r09A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cytohesin-3; PDBTitle: crystal structure of autoinhibited form of grp1 arf gtpase exchange2 factor Resolution 1.90 Å

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		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.									.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.
Query Sequence		L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	I	F	I	A	A	L	F	H	D	I	A	K	G	R	G	.	.	.	.	.	.	.	.	G	D	H	S	I	L	G	A	Q	D	V	V
Query Conservation																																																														.	.	.	.	.	.	.	.
Alig confidence																																																							.							.	.	.	.	.	.	.	.
Template Conservation																																																							.
Template Sequence		G	H	H	H	H	H	H	G	S	T	T	Q	R	N	A	Q	I	A	X	G	R	K	K	F	N	X	D	P	K	K	G	I	Q	F	L	I	E	N	D	L	L	Q	S	S	P	E	D	V	A	Q	F	L	Y	.	K	G	E	G	L	N	K	T	V	I	G	D	Y	L	G	E	R	D	D	F	N	I	K	V	L	Q
Template Known Secondary structure																																							T	T	S	S			S										.			T	T														S
Template Predicted Secondary structure																																																							.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.			.	.	.	.				.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.					.	.	.
Query SS confidence																																																		.	.					.	.	.
Query Sequence		H	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H	L	L	M	S	V	T	A	Q	R	R	D	I	Q	D	P	E	V	I	K	Q	F	A	E	E	V	.	.	Q	T	E	N	.	.	.	R	L	R	Y	L	V	C	L	T	V	A	D	I	C
Query Conservation																																																		.	.					.	.	.
Alig confidence																																				.	.	.	.											.	.					.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		A	F	V	E	L	H	E	F	A	D	L	N	L	V	Q	A	L	R	Q	F	L	W	S	F	R	L	P	G	E	A	Q	K	I	D	.	.	.	.	R	X	X	E	A	F	A	S	R	Y	C	L	C	N	P	G	V	F	Q	S	T	D	T	C	Y	V	L	S	F	A	I	I	X
Template Known Secondary structure						T	S			T	T											T	T	S					S	S						.	.	.	.														S	T	T	S	S	S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions