|   |
451 | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
W | S | H | I | V | G | Q | M | Q | F | D | L | F | H | A | Y | T | V | D | E | H | T | I | R | V | M | L | K | L | E | S | F | A | S | E | E | T | R | Q | R | H | P | L | C | V | D | V | W | P | R | L | P | S | T | E | L | I | F | I | A | A | L | F | H | D | I | A | K | G | R | G | G | D | H | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|
| . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|   | . | . | . |   |
|
|   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |
Template Sequence |   |
I | M | S | V | K | K | N | Y | R | R | V | P | Y | H | N | W | . |
. |
. |
K | H | A | V | T | V | A | H | C | M | Y | A | I | L | Q | N | N | H | T | L | F | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | E | R | K | G | L | L | I | A | C | L | C | H | D | L | D | H | R | G | F | S | N | S | Y | L | Q | K | F | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | S |
| S |
| S | S | S | S |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G | S |
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
| S |
|
|  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
512 | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | |
|
|
. | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
525 | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | |
|
|
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | I | L | G | A | Q | D | V | V | H | F | A | E | L | H | G | . |
. |
. |
. |
. |
. |
L | N | S | R | E | T | Q | L | V | A | W | L | V | R | Q | H | L | L | M | S | V | T | A | Q | R | R | D | I | Q | D | P | E | V | I | K | Q | F | A | E | E | V | Q | T | . |
. |
. |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|   | . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|   |
|
|   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
H | P | L | A | A | L | Y | S | T | S | T | M | E | Q | H | H | F | S | Q | T | V | S | I | L | Q | L | E | G | H | N | I | F | S | T | L | S | S | S | E | Y | E | Q | V | L | E | I | I | R | K | A | I | I | A | T | D | L | A | L | Y | . |
. |
. |
. |
. |
F | G | N | R | K | Q | L | E | E | M | Y | Q | T | G | S | L |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
| T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
584 | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | |
|
. | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
E | N | R | L | R | Y | L | V | C | L | T | V | A | D | I | C | A | T | N | . |
. |
E | T | L | W | N | S | W | K | Q | S | L | L | R | E | L | Y | F | A | T | E | K | Q | L | R | R | G | M | Q | N | T | P |
Query Conservation |   |
. | . | . | . | . | . |   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |   |
|
|
| . | . |
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |
|
|   |   |
|   |
Template Sequence |   |
N | L | N | N | Q | S | H | R | D | R | V | I | G | L | M | M | T | A | C | D | L | C | S | V | T | K | L | W | P | V | T | K | L | T | A | N | D | I | Y | A | E | F | W | A | E | G | D | E | M | K | K | L | G | I | Q | P | I | P |
Template Known Secondary structure |   |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| G |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
655 | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . |
  |