Job Description P27249 Confidence 47.15% Date Thu Jan 5 11:43:29 GMT 2012 Rank 141 Aligned Residues 62 % Identity 26% Template c2ihmA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide Resolution 2.40 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	R	L	W	I	E	A	G	F	S	Q	I	A	D	L	A	L	V	A	V	G	G	Y	G	R	G	E	L	H	P	L	S	D	V	D	L	L	I	L	S	R	K	K	L	P	D	D	Q	A	Q	K	V	G	E	L	L	T	L	L	W	D	V	K	L
Query Conservation
Alig confidence																															.																				.	.
Template Conservation																															.																				.	.
Template Sequence		L	Q	Q	L	I	E	A	A	V	R	Q	T	L	P	G	A	T	V	T	L	T	G	G	F	R	R	G	K	L	.	Q	G	H	D	V	D	F	L	I	T	H	P	E	E	G	Q	E	V	G	.	.	L	L	P	K	V	M	S	C	L	Q	S	Q	G	L
Template Known Secondary structure												T	T		T	T											T	T		S	.			S									S	S	T	T	T	T	T	T	.	.												T	T
Template Predicted Secondary structure																															.																				.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions