Job Description P27249 Confidence 47.13% Date Thu Jan 5 11:43:29 GMT 2012 Rank 142 Aligned Residues 62 % Identity 24% Template c2bcuA_ PDB info PDB header:transferase, lyase/dna Chain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch Resolution 2.20 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	R	L	W	I	E	A	G	F	S	Q	I	A	D	L	A	L	V	A	V	G	G	Y	G	R	G	E	L	H	P	L	S	D	V	D	L	L	I	L	S	R	K	K	L	P	D	D	Q	A	Q	K	V	G	E	L	L	T	L	L	W	D	V	K	L
Query Conservation
Alig confidence																										.																							.	.
Template Conservation																										.																							.	.
Template Sequence		I	E	Q	T	V	Q	K	A	A	Q	A	F	N	S	G	L	L	C	V	A	C	G	S	Y	.	R	R	G	K	A	T	C	G	D	V	D	V	L	I	T	H	P	D	G	R	S	H	.	.	R	G	I	F	S	R	L	L	D	S	L	R	Q	E	G	F
Template Known Secondary structure															T	T										.		T	T		S			S	S								T	T	S	S	T	T	.	.	T	T												T	T
Template Predicted Secondary structure																										.																							.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions