Job Description P27249 Confidence 93.33% Date Thu Jan 5 11:43:29 GMT 2012 Rank 84 Aligned Residues 185 % Identity 19% Template c1xotB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:camp-specific 3',5'-cyclic phosphodiesterase 4b; PDBTitle: catalytic domain of human phosphodiesterase 4b in complex with2 vardenafil Resolution 2.34 Å

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		434	.	.	.	.	.	440	.	.	.	.	.	.	.				.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.				.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure																.	.	.																			.	.	.																																									.	.
Query SS confidence																.	.	.																			.	.	.																																									.	.
Query Sequence		G	L	L	P	M	H	R	H	S	V	L	G	A	Y	.	.	.	M	P	Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	.	.	.	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	.	.
Query Conservation																.	.	.																			.	.	.																																									.	.
Alig confidence																.	.	.													.						.	.	.																					.	.	.	.	.	.	.	.	.												.	.
Template Conservation																															.																													.	.	.	.	.	.	.	.	.
Template Sequence		M	Y	A	I	F	Q	E	R	D	L	L	K	T	F	R	I	S	S	D	T	F	I	T	Y	M	M	T	L	E	.	D	H	Y	H	S	D	V	A	Y	H	N	S	L	H	A	A	D	V	A	Q	S	T	H	V	L	L	S	T	.	.	.	.	.	.	.	.	.	P	A	L	D	A	V	F	T	D	L	E	I	L
Template Known Secondary structure									T	T					T	T															.		T	S		T	T	S	S	S	S	S															T	T		.	.	.	.	.	.	.	.	.	G	G	G	T	T	T	S
Template Predicted Secondary structure																															.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.										.	.	.	.	.	.	.	260	.	.	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.			.	.	.	.	.	.	530	.	.	.	.	.	.	.	.																								.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	F	I	A	A	L	F	H	D	I	A	K	G	R	G	G	D	.	.	H	S	I	L	G	A	Q	D	V	V	H	F	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H	L	L	M	S
Query Conservation																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	I	F	A	A	A	I	H	D	V	D	H	P	G	V	S	N	Q	F	L	I	N	T	N	S	E	L	A	L	M	Y	N	D	E	S	V	L	E	N	H	H	L	A	V	G	F	K	L	L	Q	E	E	H	C	D	I	F	M	N	L	T	K	K	Q	R	Q	T	L	R	K	M	V	I	D	M	V	L	A	T
Template Known Secondary structure										T	T	T	T			S	S								T	T								T	T	S	S													T	T	S	S	G	G	G		T	T	T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.																.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.			.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		V	T	A	Q	R	R	D	I	Q	D	P	E	V	I	K	Q	F	A	E	E	V	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	R	L	R	Y	L	V	C	L	T	V	A	D	I	C	A	T	N	E	T	.	.	L	W	N	S	W	K	Q	S	L	L	R	E	L	Y	F	A	T	E	K
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence							.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation							.	.	.	.	.
Template Sequence		D	M	S	K	H	.	.	.	.	.	M	S	L	L	A	D	L	K	T	M	V	E	T	K	K	V	T	S	S	G	V	L	L	L	D	N	Y	T	D	R	I	Q	V	L	R	N	M	V	H	C	A	D	L	S	N	P	T	K	S	L	E	L	Y	R	Q	W	T	D	R	I	M	E	E	F	F	Q	Q	G	D	K
Template Known Secondary structure			G	G	G		.	.	.	.	.													T					T	T	S						S																	T		G	G	G	S
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		346	.	.	.	350						.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		624	.	.	.	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	R	G	M	Q	N	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	E	R	G	M	E	I	S	P
Template Known Secondary structure						T					T
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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