Job Description P27249 Confidence 65.58% Date Thu Jan 5 11:43:29 GMT 2012 Rank 132 Aligned Residues 103 % Identity 17% Template c1vj7B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. Resolution 2.10 Å

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		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	I	F	I	A	A	L	F	H	D	I	A	K	G	R	G	G	D	H	S	I	L	G	A
Query Conservation
Alig confidence																		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		D	Y	A	T	A	A	H	F	Y	Q	V	R	K	S	G	E	.	P	Y	I	V	H	P	I	Q	V	A	G	I	L	A	D	L	H	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	T	V	A	C	G	F	L	H	D	V	V	.	.	.	.	.	.	.	.	E	D	T	D
Template Known Secondary structure								T	T	T		B		T	T	S	S	.	B	T	T													T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T	T			.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																				.	.	70	.	.	.	.	.	.	.	.	.	80									.	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.		.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		Q	D	V	V	H	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H	L	L	M	S	V	T	A	Q	R	R	D	I	Q	D	P	E	V	I	.	K	Q	F	A	E	E	V	Q	T	E	N	R	L	R	Y	L
Query Conservation																																															.
Alig confidence													.	.																			.	.	.	.	.	.	.	.							.
Template Conservation													.	.																			.	.	.	.	.	.	.	.
Template Sequence		I	T	L	D	N	I	E	F	D	F	G	.	.	K	D	V	R	D	I	V	D	G	V	T	K	L	G	K	V	E	S	.	.	.	.	.	.	.	.	K	D	I	R	V	I	L	V	K	L	A	D	R	L	H	N	M	R	T	L	K	H	L
Template Known Secondary structure													.	.														T	T				.	.	.	.	.	.	.	.																			T	G	G	G	S
Template Predicted Secondary structure													.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions