Job Description P27249 Confidence 99.68% Date Thu Jan 5 11:43:29 GMT 2012 Rank 9 Aligned Residues 170 % Identity 16% Template c1vfgB_ PDB info PDB header:transferase/rna Chain: B: PDB Molecule:poly a polymerase; PDBTitle: crystal structure of trna nucleotidyltransferase complexed2 with a primer trna and an incoming atp analog Resolution 2.80 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	T	L	I	D	L	R	D	E	T	L	F	M	R	Q	P	E	A	I	L	R	M	F	Y	T	M	V	H	N	S	A	I	T	G	I	Y	S	T	T	L	R	Q	L	R	H	A	R	R	H	L	Q	Q	P	L	C	N	I	P	E	A	R	K	L	F	L	S	I	L	R	H	P	G	A	V	R	R	G	L
Query Conservation
Alig confidence																																			.	.																																									.
Template Conservation																																			.	.																																									.
Template Sequence		L	K	D	K	V	I	R	V	L	H	P	V	S	F	I	E	D	P	V	R	I	L	R	A	L	R	F	A	G	R	L	N	F	.	.	K	L	S	R	S	T	E	K	L	L	K	Q	A	V	N	L	G	L	L	K	E	A	P	R	G	R	L	I	N	E	I	K	L	A	L	R	E	D	R	F	.	L	E	I	L
Template Known Secondary structure				T	T				B	S	S	T	T						T	T													T		.	.																T	T	G	G	G	T	S																S	S		.
Template Predicted Secondary structure																																			.	.																																									.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	M	H	R	H	S	V	L	G	A	Y	M	P	Q	W	S	H	I	V	G	Q	M	Q	F	D	L	F	H	A	Y	T	V	D	E	H	T	I	R	V	M	L	K	L	E	S	F	A	S	E	E	T	R	Q	R	H	P	L	C	V	D	V	W	P	R	L	P	S	T	E	L	I	F	I	A	A	L	F	H	D
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Y	R	K	Y	R	V	L	E	E	I	I	E	G	F	Q	W	N	E	K	V	L	Q	K	L	Y	A	L	R	K	V	V	D	W	H	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	S	E	E	R	I	D	Y	G	W	L	Y	L	L	I	L	I	S	N
Template Known Secondary structure							T	T						S	T	T																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S															S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	K	G	R	G	G	D	H	S	I	L	G	A	Q	D	V	V	H	F	A	E	L	H	G	L	N	S	R	E	T	Q	L	V	A	W	L	V	R	Q	H	L	L	M	S	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	Y	E	R	.	.	.	.	.	.	.	.	.	.	.	G	K	H	F	L	E	E	M	S	A	P	S	W	V	R	E	T	Y	K	F	M	K	F	K	L	G	S	L	K	E
Template Known Secondary structure				S	S	T	.	.	.	.	.	.	.	.	.	.	.	T							T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.												.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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