Job Description P27249 Confidence 99.85% Date Thu Jan 5 11:43:29 GMT 2012 Rank 6 Aligned Residues 159 % Identity 14% Template c1u8sB_ PDB info PDB header:transcription Chain: B: PDB Molecule:glycine cleavage system transcriptional PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor Resolution 2.45 Å

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		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	G	T	E	I	F	I	W	S	P	D	R	P	Y	L	F	A	A	V	C	A	E	L	D	R	R	N	L	S	V	H	D	A	Q	I	F	T	T	R	D	G	M	A	M	D	T	F	I	V	L	E	P	D	G	N	P	L	S	A	D	R	H	E	V	I	R	F	G	L	E	Q	V	L	T	Q	S	S	W	Q
Query Conservation
Alig confidence																																																.						.	.	.	.	.	.																						.
Template Conservation																																																.						.	.	.	.	.	.																						.
Template Sequence		T	Q	H	L	V	I	T	A	V	G	T	D	R	P	G	I	C	N	E	V	V	R	L	V	T	Q	A	G	C	N	I	I	D	S	R	I	A	M	F	G	K	E	F	T	L	L	.	M	L	I	S	G	.	.	.	.	.	.	S	P	S	N	I	T	R	V	E	T	T	L	P	L	L	G	Q	Q	H	D	L	.
Template Known Secondary structure															T	T											T	T	T												T	T						.						.	.	.	.	.	.																		T	T	T		.
Template Predicted Secondary structure																																																.						.	.	.	.	.	.																						.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.		.	.	860	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		P	P	Q	P	R	R	Q	P	A	K	L	R	H	F	T	V	E	T	E	V	T	F	L	P	T	H	T	D	R	K	S	F	L	E	L	I	A	L	D	Q	P	G	L	L	A	R	V	G	K	I	F	A	D	L	G	I	S	L	H	G	A	R	I	T	T	I	G	E	R	V	E	D	L	.	F	I	I	A	T	A
Query Conservation																																																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	I	T	M	M	K	R	T	S	P	H	D	H	Q	T	H	A	Y	T	V	E	V	Y	V	E	S	D	D	K	L	G	L	T	E	K	F	T	Q	F	F	A	Q	R	Q	I	G	M	A	S	L	S	A	Q	T	I	S	K	N	Q	F	H	I	A	I	S	A	R	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																S										S			T	T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		864	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	R	A	L	N	N	E	L	Q	Q	E	V	H	Q	R	L	T	E	A	L	N	P	N	D
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		S	G	C	N	.	.	.	.	.	L	M	Q	L	Q	E	E	F	D	A	L	C	T	A	L	D
Template Known Secondary structure		T	T	S		.	.	.	.	.															T	T
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		151	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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