Job Description P0A912 Confidence 5.55% Date Thu Jan 5 11:09:08 GMT 2012 Rank 68 Aligned Residues 50 % Identity 14% Template c3pa8A_ PDB info PDB header:toxin/peptide inhibitor Chain: A: PDB Molecule:toxin b; PDBTitle: structure of the c. difficile tcdb cysteine protease domain in complex2 with a peptide inhibitor Resolution 2.00 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.
Query Sequence		L	R	S	N	P	S	Y	K	V	T	V	E	G	H	A	D	E	R	G	T	P	E	Y	N	I	S	L	G	E	R	R	A	N	A	V	K	M	Y	L	Q	G	K	.	.	.	.	.	.	.	.	G	V	S	A	D	Q	I	S	I	V	S
Query Conservation																																												.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		I	S	D	R	P	K	I	K	L	T	F	I	G	H	G	K	D	E	F	N	.	.	.	T	D	I	F	A	G	F	D	V	D	S	L	S	T	E	I	E	A	A	I	D	L	A	K	E	D	I	S	P	K	S	I	E	I	N	L	L	G
Template Known Secondary structure		T	T	T		S												S	S			.	.	.	S	S			T	T																		T	T	T				S								S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions