Job Description P27242 Confidence 78.88% Date Thu Jan 5 11:43:22 GMT 2012 Rank 41 Aligned Residues 296 % Identity 8% Template d2c1xa1 SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like Resolution 1.9

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	C	L	I	I	H	D	N	N	K	L	G	D	L	I	V	L	S	S	I	Y	R	E	L	Y	S	K	G	V	K	I	T	L	L	T	N	R	K	G	G	E	F	L	S	N	N	K	N	I	F	E	F	C	I	K	E	S	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		P	H	V	A	V	L	A	F	P	F	.	S	T	H	A	A	P	L	L	A	V	V	R	R	L	A	A	A	A	P	H	A	V	F	S	F	F	S	T	S	Q	S	N	A	S	I	F	Q	C	N	I	K	S	Y	D	I	S	D	G	V	P	E	G	Y	V	F	A	G	R	P	Q	E	D	I	E	L	F	T	R	A
Template Known Secondary structure											S	.	S	S	S																T	T	S																	T	T												T	T							T	T
Template Predicted Secondary structure												.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
						101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	F	L	E	M	L	T	L	C	K	H	L	R	D	L	Q	F	D	I	V	L	D	P	F	E	T	M	P	S	F	K	H	S	L	I	L	S	S	L	K	D	S	Y	I	L	G	F	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																					.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		A	P	E	S	F	R	Q	G	M	V	M	A	V	A	E	T	G	R	P	V	S	C	L	V	.	.	.	A	D	A	F	I	W	F	A	A	D	M	A	A	E	M	G	V	A	W	L	P	F	W	T	A	G	P	N	S	L	S	T	H	V	Y	I	D	E	I	R	E	K	I	G	V	S	G	I	Q	G	R	E	D
Template Known Secondary structure																		T								.	.	.			T	T	S	T	T									T									S										T										S	S			T	T		T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
								149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	W	Y	K	R	Y	Y	S	F	Y	H	P	H	D	E	C	L	K	E	H	M	S	T	R	A	I	E	I	L	K	H	I	Y	G	E	G	K	F	S	T	N	Y	D	L	H	L	P	V	D	V	E	D	K	I	K	E	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	L	N	F	I	P	G	M	S	K	V	R	F	R	D	L	Q	E	G	I	V	F	G	N	L	N	S	L	F	S	R	M	L	H	R	M	G	Q	V	L	P	K	A	T	A	V	F	I	N	S	F	E	E	L	D	D	S	L	T	N	D	L	K	S	K	L	K	T	Y	L	N	I	G	P	F	N	L	I	T
Template Known Secondary structure			B		T	T	S	T	T		T	T		B	G	G	G	S		T	T	T	S	S	S		T	T	S													G	G	G	S	S					S	S		G	G	G												S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
											206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	D	T	R	I	V	I	I	N	P	L	G	A	K	K	I	C	R	L	T	F	E	Q	I	K	V	I	Y	Q	E	V	K	T	H	F	E	N	Y	R	I	I	F	T	G	L	P	Q	D	L	L	T	.	.	.	.	.	I	P	I	L	E	I	E	T	L	P	F	D	E	F	I
Query Conservation		.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.															.	.	.																		.	.																.	.	.	.	.
Template Conservation																									.	.	.																		.	.
Template Sequence		G	C	L	Q	W	L	K	E	R	K	P	T	S	V	V	Y	I	S	F	G	T	V	T	.	.	.	T	P	P	P	A	E	V	V	A	L	S	E	A	L	E	A	S	.	.	R	V	P	F	I	W	S	L	R	D	K	A	R	V	H	L	P	E	G	F	L	E	K	T	R	G	Y	G	M	V	V	P	W	A	P
Template Known Secondary structure									T	S		T	T									S	S		.	.	.																		.	.	T									G	G	G	G	G	G	S		T	T						T	T	T					S
Template Predicted Secondary structure																									.	.	.																		.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		272	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.													.
Query SS confidence								.													.
Query Sequence		Y	T	V	A	L	T	.	K	Y	S	D	F	V	I	S	V	D	T	A	.	L	V	H	I	A	A	A	Y	H	K	P	T	L	A	F	Y	P	N	S	R	T	P	E	Y	P	S	H	L	I	W	S	P	N	H	H	K	S	I	Q	I	V	S	P	T	Y	T	V	K	D	I	D	T	E	T	L	T	N	S	V	K
Query Conservation								.													.
Alig confidence								.													.																.	.																										.	.	.	.	.
Template Conservation																																					.	.																										.	.	.	.	.
Template Sequence		Q	A	E	V	L	A	H	E	A	V	G	A	F	V	T	H	C	G	W	N	S	L	W	E	S	V	A	G	G	V	P	L	I	C	R	.	.	P	F	F	G	D	Q	R	L	N	G	R	M	V	E	D	V	L	E	I	G	V	R	I	E	G	.	.	.	.	.	G	V	F	T	K	S	G	L	M	S	C	F	D
Template Known Secondary structure							T	S	T	T																				T							.	.			S	T	T											T	S							G	G	.	.	.	.	.	G	S
Template Predicted Secondary structure																																					.	.																										.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.	.	.	.	.	.
		350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		408	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions